Bradyrhizobium daqingense: LPJ38_10090
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Entry
LPJ38_10090 CDS
T07756
Name
(GenBank) GAF domain-containing protein
Organism
bdg
Bradyrhizobium daqingense
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GAF_2
EAL
GAF
GGDEF
GAF_3
DYW_deaminase
Motif
Other DBs
NCBI-ProteinID:
UFS91049
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Position
2122984..2127099
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AA seq
1371 aa
AA seq
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MPTTLARTFAALSAINEAILYAKSPEELYQKVCDAGFSSGDFLAVAVFLVEPDGRRLGFA
AGCGDDVARLRSIVITAEAGTPEGSGVGGEAFRDQKLCISNDYLNDPRSLAWRAGATSAA
IGAAAALPLLCNGKSVGVLFVTRREAGSLNVQMVSLFERMSANISYALDNFARETARQTS
ERATRRLNRMFAAISATNEAILRAKTEQELYQLVCDASVHGGKSLATVVLLKERDSHWLK
PAAGTGQNLELVAQTKYSVDADNPYGRGVSGNVFRSQKPHVEEDLVSRTKGTLWEEVNVN
AGVAACVAAPLVKGGESVGVILFFISKSWAKDQEVVALLLRMAENVSFALQNFDRDEEKA
QIAREEERLARMYAALSATNEAIIRATSRAELFDLVCEASVQGGKFGSATIALAEPASEL
LRVVASAGPNSDEVRKLKLATTDKVPEGRGLTGTCFRTGQPCLSNDLLADDRLQPWYDSA
RRTGVKSSAALPLLVGDRTEGVFLFNSLEIGTFTPELLELLERLARNVSFAVANLDRAEE
KAKADKQRDRLSGMFAALSATNEAIMRAQTREELFDVACQAAVLGGMFASATIGLIDETC
ELVRVVAVKGRLQERMVGRSCAISSEHPEGQGIIGISVRTRRPSVINDYMHDPRSAHWHS
KAVEDGTRAAASFPLLRAGQEPIGILLFLAPEEDTFTPDLVELLARLAENVSFALDNFDR
AEEKARTEAQKERLRRMFAALSATNEAIMRAKSRAELFDLVCLAASNGAKFTSTTVALAS
ADSDQLKIVASAGPSSDTTRNVRLSVDPERPEGRGMAGTAFRTRQPCISNDYLTDARVSA
FHAIVRGDGARSGAAIPLIVHDLAVGVMIYMSTERDTFTAEFVELLQRLADNVAFAMENF
DRADEKHKADERIEYLASHDSLTDLPNRETFNGLLREAIDTAQRHDHRFAVLFIDLDRFK
VINDSLGHEAGDLLLLEVANRLRGALRASDVVARLGGDEFVVILDQCGEIDVVQHIATGL
LAALAEPMELAGHECHTTASIGIAMYPANGSDAQTLTKNADMAMYLAKEDGKNGYRFFSK
EVKTQSIERLSLESALRRALEREQFSLNYQPKIDMETGQITGVEALLRWTHPDLGNVSPA
QFIPLAEETGLIVPIGRWVLNEACAQAMAWQRRGLLPLSMAVNLSPRQFADEHLLQDVDE
ALAASGMSPVLLQLEVTESMMMRNVGRALKVLDAIQSRGIRLAIDDFGTGYSSMSLMKHF
PIDTIKIDRSFVRDLPQDSEDQAIAQAIISMGKALGMTVVAEGVENAEQEAFLRTHGCDE
MQGYLISKPLPARQMAELLRPMVPIGAPPLQPEQDLAATEAASLRLKRAVV
NT seq
4116 nt
NT seq
+upstream
nt +downstream
nt
gtgccgacgacactcgcgcgcacctttgcggcgttgagcgccatcaacgaagcgatcctc
tacgcgaaatcgccggaggagctttaccagaaggtctgcgacgccgggttttcgagcggg
gactttttggcggtcgccgtgttcctggtggagccggatggccggcggctgggcttcgcg
gccggctgtggcgacgacgttgcgcggctgcgctccatcgtgatcacggcggaagccggc
acacctgaaggctcgggtgtcggcggcgaggcatttcgcgatcagaagctgtgcatcagc
aacgattatctgaacgatccgcggtcgctggcatggcgcgcaggtgcgacgtcggccgcc
atcggcgcagctgcggcgctgccactgctctgcaacggcaagagtgtcggcgttctcttc
gtgacccgccgcgaggccggctctctgaacgtgcagatggtgtcgctgttcgagcggatg
tcggccaacatttcctatgcgctggataacttcgcgcgcgagaccgcgcggcagaccagc
gagcgggcgacgcggcggctgaaccgcatgttcgccgcaatcagcgccaccaacgaggcc
attctgcgcgccaaaacggagcaggagctgtaccagctcgtgtgcgacgcctcggtccat
gggggcaagtcgctggcgacggtcgttctgttgaaggagcgggattcccactggctgaag
cccgccgcaggcactggccagaatctcgagctcgtcgcacagaccaaatactccgtcgat
gccgacaatccctatggccgcggcgtctccggcaatgtcttccgtagtcaaaagcctcat
gtcgaggaagacctcgtcagtcgcaccaagggaacgctgtgggaggaggtcaatgtcaac
gcgggtgttgcagcctgcgtcgcggccccgctggtcaaaggtggcgagagtgtcggcgtc
atcctcttcttcatcagcaaatcctgggccaaagatcaggaagtcgtcgcgcttctgctg
cgcatggcggagaatgtttcgtttgcactccagaacttcgatcgcgacgaggagaaggcg
cagatcgcgcgcgaggaagaacggctcgcgcgcatgtatgccgcgctgagcgccaccaat
gaagcgatcatccgggcgacgtcgcgtgccgagctgttcgatctcgtatgcgaagcctcg
gtacagggcggcaagttcggctcggcgacgatcgcgctcgccgagcctgcctccgagcta
ttgcgggtcgtcgcctccgccgggccgaactcagatgaagtgcgcaaactcaaacttgcc
acgacggataaggtgccggagggacgaggcctgaccggcacgtgtttccgcaccggacag
ccctgcctgtccaacgacctgctggccgacgaccggctccagccgtggtacgacagtgcg
cgccgcaccggcgtcaagtcttccgctgcgctgccgctgctcgtcggcgaccgcaccgaa
ggcgtgttcctgttcaactccctcgagatcggcacattcacgcccgagttgctcgaactg
ctggaacggcttgcgcgcaacgtctcgttcgcggtcgcaaatctcgatcgcgccgaggag
aaggcgaaggccgacaagcagcgggaccggttgagcggcatgttcgcggcattgagcgcc
accaacgaagcgatcatgcgcgcacagacccgcgaggagctgttcgacgtcgcatgtcag
gcggcggtactgggcggcatgttcgcctcggcgacgatcggactcatcgacgagacatgt
gagctggtccgggtcgtcgcggtgaagggacggctgcaggagcggatggtcgggcggagc
tgcgcgatttcctccgagcatcccgagggccaggggatcatcggaatttcggtgcggacg
cgccggcccagtgtcatcaacgactacatgcacgatccacgctcggcacactggcactca
aaggccgtggaggacgggacccgtgccgccgccagcttcccgcttctgcgcgccggccag
gagccgatcggcatcctgctgttccttgctccggaggaggataccttcacaccggatctg
gtcgagctgctggcgcgcctcgcggaaaacgtctccttcgcgctcgacaatttcgatcgc
gccgaggaaaaggcccgcaccgaggcgcagaaggagcgactgaggcgcatgttcgcggcc
ctgagcgcgaccaatgaggcgatcatgcgggcgaagtcgcgcgccgaattgttcgacctc
gtctgtctcgccgcttcgaacggcgccaagttcacctcgacgaccgtcgcgctcgcaagc
gccgacagcgaccagctcaagatcgtcgccagcgccggaccgtcgtccgataccacgcgt
aacgtccgcctctcggtcgaccccgaacgccccgaaggacgcgggatggcgggcaccgcg
ttccggacccggcagccctgcatcagcaacgactatctcactgacgcgcgtgtgagcgcc
ttccacgccatcgttcgcggcgacggtgcgcgttcgggtgcggcgatcccgctcattgtt
cacgatctggctgtcggcgtcatgatctacatgtcgacggagcgggacaccttcacggcc
gagttcgtcgagctgttgcagcgcctcgccgacaacgtcgccttcgcgatggagaatttc
gatcgcgccgacgagaagcacaaggccgacgagcggatcgaataccttgcttcgcatgac
agcctgaccgacctgccgaaccgcgagacgttcaacgggctgctgcgcgaggcgatcgac
acggcgcagcgccacgaccaccgttttgcggtgctgttcatcgatctcgaccgcttcaag
gtcatcaacgattcgctgggccacgaggccggcgacctgctcctgctcgaagtcgcgaac
cgcctgcgtggtgcgttgcgggccagcgacgtcgtggcacggctcggcggcgatgagttc
gtggtgatcctcgaccagtgcggcgaaatcgatgtcgtccagcacatcgccaccgggttg
ctcgccgcgctcgccgagcccatggagctggccgggcacgagtgccacaccacggcctcg
atcggcatcgctatgtatccggccaacggttccgacgcgcagacgctgaccaagaacgcc
gacatggcgatgtatctcgccaaggaggacggcaagaacggctatcgcttcttctccaag
gaagtgaagacgcagtcgatcgagcggctgtcgctggagagcgcactgcgccgggcgctg
gagcgcgagcagttctcgctgaactatcagcccaagatcgacatggagaccggccagatc
accggcgtcgaagcgctgctgcgctggacccatcccgatctcggcaatgtctcgccggcg
cagttcattccgctggctgaggaaaccggcctgatcgtcccgattggccgctgggtgctg
aacgaggcctgcgcgcaggccatggcctggcagcgccgcggcctgctgccgctgtcgatg
gcggttaacctgtcgccgcggcagttcgccgacgagcatctgttgcaggacgtcgacgag
gcgctggcggcctccggcatgtcgccggtgctgctccagctcgaggtcaccgagagcatg
atgatgcgcaatgtcggtcgcgcgctcaaggtgctcgacgccatccagagccgcggcatc
cgtcttgccatcgacgatttcggcacgggctattcgtcgatgtcgctgatgaagcacttc
ccgatcgacacgatcaagatcgatcgctccttcgtgcgcgacttgccgcaggattcggaa
gaccaggcgatcgcacaggcgatcatcagcatgggcaaggcgctcggcatgaccgtcgtt
gccgaaggcgtcgagaacgccgagcaggaggcgttcctgcgcactcatggctgcgacgag
atgcagggctatctgatctccaaaccattgccggcgcggcagatggccgagctgctgcgg
ccgatggtcccgattggcgctccgccgctccagccggagcaagaccttgccgcgaccgaa
gctgcatcattacggctgaaacgcgctgtcgtctga
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