Bradyrhizobium daqingense: LPJ38_14090
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Entry
LPJ38_14090 CDS
T07756
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
bdg
Bradyrhizobium daqingense
Pathway
bdg00730
Thiamine metabolism
bdg01100
Metabolic pathways
bdg01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
bdg00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
LPJ38_14090 (thiC)
Enzymes [BR:
bdg01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
LPJ38_14090 (thiC)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
UFS91806
LinkDB
All DBs
Position
complement(2942011..2943909)
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AA seq
632 aa
AA seq
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MNIRSNPDKTVPAVTTGPLPSSRKIFASPDAAPDLRVPLREIILSEGAGEPNLPVYDTSG
PYTDPSVTIDVNAGLARHRKQWVLERGGVEEYEGRQIKPEDNGSVSTDKAARAFSAYHKP
LRGLDGHKITQLEFARAGIVTKEMIYVAARENLGRKQQLERAEAALADGESFGASVPAFI
TPEFVRDEIARGRAIIPSNINHSELEPMIIGRNFLTKINANIGNSAVTSSVEEEVEKMVW
AIRWGADTVMDLSTGRNIHTTREWILRNSPVPIGTVPIYQALEKCNGDPVKLTWELYKDT
LIEQCEQGVDYFTIHAGVRLQYIHLTASRVTGIVSRGGSIMAKWCLAHHKESFLYTHFDE
ICDLMRKYDVSFSLGDGLRPGSIADANDRAQFAELETLGELTKIAWDKGCQVMIEGPGHV
PMHKIKINMDKQLKECGEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGCAMLCYVTP
KEHLGLPDRNDVKTGVITYKIAAHAADLAKGHPAAQLRDDALSRARFEFRWTDQFNLGLD
PDTAKNFHDETLPKEAHKVAHFCSMCGPKFCSMKITQDVRDYAATLNDPNSVGMSMSGTA
EDGMAKMSAKFKEMGESLYLDAEKVKESNRVL
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgaacatccgctccaatcccgacaagaccgtgcccgccgtcaccaccggcccccttccc
tcctcgcgcaagatcttcgcctcgcccgatgccgcgcccgatctgcgcgtgcccttgcgc
gagatcatcctctccgaaggcgcgggcgagcccaacctgccggtctacgacacctccggc
ccctacaccgatccgtccgtcaccatcgacgtcaacgccggccttgcccgccatcgcaag
caatgggtgctggagcgcggcggcgtcgaggaatatgagggccgccagatcaagccggaa
gacaacggcagcgtctccaccgacaaggccgcgcgcgccttctcggcctatcacaagccg
ctgcgcggcctcgacggccacaagatcacccagctcgaattcgcccgcgccggcatcgtc
accaaggagatgatctacgtcgccgcccgcgaaaatctcggccgcaagcagcagctcgag
cgcgcggaagcagctcttgccgacggcgagagttttggtgcatcggtgcccgccttcatc
acgccggagttcgtgcgcgacgagatcgcgcgcggccgcgccatcatcccctccaacatc
aaccacagtgaactcgagccgatgatcatcggccgcaacttcctgaccaagatcaacgcc
aacatcggcaactcggccgtgacctcgtcggtcgaggaagaggtcgagaagatggtgtgg
gcgatccgctggggcgccgacaccgtgatggacctctcgacgggccgcaacatccacacc
acgcgcgaatggattttgcgcaactcgccggtgccgatcggtaccgtgccgatctaccag
gcgctggagaagtgcaacggcgatcccgtcaagctgacctgggagctctacaaggacacg
ctgatcgagcagtgcgagcagggcgtggactatttcaccatccacgccggcgtgcgcctg
caatacatccacctcactgccagccgcgtcaccggcatcgtcagccgcggcggctcgatc
atggcgaagtggtgcctggcgcatcacaaggagagcttcctctacacgcatttcgacgag
atctgcgatctcatgcgcaagtatgacgtctcgttctcgctcggcgacggcctgcgtccg
ggctcgatcgccgatgccaacgaccgcgcgcagtttgccgagctggagacgctcggcgag
ctcaccaagatcgcgtgggacaagggctgccaggtcatgatcgaaggccccggccacgtg
ccgatgcacaagatcaagatcaacatggacaagcagctcaaggagtgcggcgaggcgccg
ttctatacgcttggaccgctgaccaccgacatcgcgccgggctacgaccacatcacgtca
ggcatcggcgccgccatgatcggctggttcggctgcgccatgctctgctacgtcacgccg
aaggagcatctcggcctgcccgatcgcaacgacgtcaagaccggcgtcattacctacaag
atcgccgcccatgccgccgacctcgccaagggccaccccgccgcgcaactgcgcgacgac
gcgctctcgcgcgcgcggttcgaattccgctggaccgatcagttcaacctcggcctcgat
cctgataccgcgaagaacttccacgacgagaccctgccgaaggaagcccacaaggtcgcc
catttctgctcgatgtgcggcccaaaattctgctcgatgaagatcacgcaggacgtgcgg
gactacgcggcgacgctgaacgatccgaacagcgtgggcatgtcgatgagcggcaccgcg
gaggacggcatggcgaagatgagcgcgaagttcaaggagatgggcgagagcttgtatctg
gatgcggagaaggtgaaggagagtaatcgggtgttgtga
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