Bradyrhizobium daqingense: LPJ38_24685
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Entry
LPJ38_24685 CDS
T07756
Name
(GenBank) septal ring lytic transglycosylase RlpA family protein
KO
K03642
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
bdg
Bradyrhizobium daqingense
Brite
KEGG Orthology (KO) [BR:
bdg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bdg01011
]
LPJ38_24685
Enzymes [BR:
bdg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
LPJ38_24685
Peptidoglycan biosynthesis and degradation proteins [BR:
bdg01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
LPJ38_24685
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPBB_1
Motif
Other DBs
NCBI-ProteinID:
UFS86848
LinkDB
All DBs
Position
complement(5220563..5221498)
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AA seq
311 aa
AA seq
DB search
MGIRRSDSVLRAARGVAAVATCLALANCASSNKFASRVDPKYGVSSSPRVVAFGDPVPKG
GGTYRVGKPYVVAGKTYVPEEDVNYRAEGMASWYGDDFHGRLTANGEVFDMTSLTAAHPT
LPMPSYARVTNVSNGKSLIVRVNDRGPYHGNRLIDVSNKAAELLEFKGNGVAKVRVEYVG
RAPLEGSDDRQLMATLRTGVPAPTPSMVRVASAKPFVPELASSSRGAIRGEVPMPEGRPY
NLGNSSADMASLNATSEMSASSRGRGRALQNARAVSYDEDGRYATERAPSAAYSSDGAAE
ARSILSGRGLY
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggggatccgacggtcagattcggttttgcgggccgcgcgtggtgtcgcggcggtcgcg
acctgccttgcgctcgccaattgcgcctcctcgaacaagttcgccagccgcgtcgacccg
aaatacggcgtgtcctcgagcccccgggtggtggccttcggcgatccggtcccgaagggc
ggcggcacctaccgcgtcggcaagccctatgtcgtggccggcaagacctacgtgcccgag
gaggacgtcaactatcgggctgagggcatggcgtcctggtatggcgacgatttccacggc
cgcctgaccgccaatggcgaggtgttcgacatgacctcgctgacggcggcgcatccgacc
ctgccgatgccgtcctatgcgcgggtgaccaatgtctcgaacggcaagtcgctgatcgtt
cgcgtcaatgaccgcgggccctatcacggcaaccggctcatcgacgtctcgaacaaggcc
gccgaactgcttgaattcaaaggcaatggcgtcgccaaggtgcgggtcgaatatgtcggc
cgggcgccgctcgaaggctcggacgaccgccagctgatggcgacgctgcgcaccggcgtt
ccggcgccgacaccctccatggtccgggtcgcctcggccaagcccttcgtgccggaattg
gcctcgtcgagccgcggtgccattcgcggcgaggtgccgatgccagaggggcgcccctat
aatctcggcaacagctcggccgatatggcctcgctcaacgcgacctcggaaatgtcggca
tcgagccgcggccggggaagggcccttcagaatgcccgcgcggtgtcctatgacgaggac
ggccgctacgcgaccgagcgcgcgccgtccgccgcctacagctccgacggtgcggccgag
gctcgcagcatcctgagcggccgcgggctctactga
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