Bradyrhizobium daqingense: LPJ38_25310
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Entry
LPJ38_25310 CDS
T07756
Name
(GenBank) AAA family ATPase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
bdg
Bradyrhizobium daqingense
Pathway
bdg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bdg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LPJ38_25310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bdg03400
]
LPJ38_25310
Enzymes [BR:
bdg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LPJ38_25310
DNA repair and recombination proteins [BR:
bdg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LPJ38_25310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_4
UvrD_C_2
Viral_helicase1
AAA_11
SH3_13
Herpes_Helicase
AAA_22
PhoH
HHH_5
Pif1_2B_dom
AAA
HerA_C
AAA_16
NACHT
UvrD-helicase
nSTAND3
ATP_bind_1
CbiA
Motif
Other DBs
NCBI-ProteinID:
UFS86962
LinkDB
All DBs
Position
complement(5347606..5349507)
Genome browser
AA seq
633 aa
AA seq
DB search
MLEQLGRHARSGDTIVRHLAEDPAFEGIGYATAAKLWEAFGERLYALLGDVASLTAVLNE
DRAERLVLAWKEKLAEGDVVVWLDEHGFEKRLAKKIIRLWGAEAAAKLREQPYAMMALAD
WPIVDAAGRKMGIAADDPRRLVAAVEAALYARLDQHHTWIGERDLVAAAGRLLKCAPARA
GEAVAAAVAQRAAIPIAGGFQAAGAHMMERYVADRIREMLTEPAMGDLIAREVSDAELAA
WLDRQDMGVALDDEQREAVRIAVQERFGIVRGGAGVGKTTVLRAVARACAAFGRSTHMMA
LAGRAAVRIGEATGFPASTIAAFLKGVEARKIPLGPESLVVVDEASMLDLPTMYRILRAL
PDGCRLLLVGDPGQLPPIQFGLVLHALGERPEIPSVVLTRVYRQTEATGIPAVAGAVRSG
RLPSLPDKACASSGGVALIPAGEVTTDQIVDVVAGLGGFSEDLRIVCAVKAGPAGTEALN
ARFHDIFAVGRRRHPTRRLAEGEPVMFLKNDYQAGLRNGSLGRITSIEEGRVAVDFDGTE
VELSGYGLDDLTLAYAITVHKAQGSSFRKVVIPVQKTRLLDRSLIYTAISRAKDSAVLVG
ASEVLQQSLERDAHAGRRETALALLMEIGSPES
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgcttgagcagctcggccgtcacgccagatcgggcgacaccatcgtgcgccacctcgcc
gaggacccggcgttcgagggcatcggttacgccaccgcagcgaagctgtgggaggccttc
ggcgagcgcctctacgcgctgctcggcgacgtcgcgagcctgaccgcggtcctgaacgag
gaccgcgccgagcggctggtgctggcgtggaaggagaagctcgccgagggcgacgtcgtg
gtctggctcgacgaacacggcttcgagaaacgcctggccaagaagatcatccgcctgtgg
ggcgccgaagccgccgcgaagctgcgggagcagccgtacgcgatgatggcgctcgccgac
tggccgatcgtcgacgccgccggccggaagatgggcatcgccgccgacgatcccagacgc
ctcgtcgccgcggtggaggccgcgctctacgcgcggctggaccagcaccacacctggatc
ggcgagcgcgacctcgtcgccgcggccggccggctgttgaagtgcgcgccggcgcgggcc
ggggaggcggtggcggccgcggtcgcgcagcgggcggcgatcccgatcgcgggcggcttc
caggccgccggcgcccacatgatggagcgctacgtcgccgaccggatcagggagatgctg
accgagccggccatgggcgacctgatcgcccgcgaggtctccgacgccgagctcgccgcc
tggctcgaccggcaggacatgggcgtggcgctcgacgacgaacagcgcgaggcggtgcgc
atcgcggttcaggaacggttcggcatcgtcaggggcggagccggcgtcggcaaaaccacg
gtcctgagggccgtcgcccgggcctgcgccgccttcggccgctccacccacatgatggcc
ctggcgggccgtgccgccgtccggatcggcgaggccaccggctttcccgcatcgaccatc
gccgcgttcctgaagggcgtcgaagcccggaagatcccgctcggcccggaatcgctggtg
gtggtcgacgaggcctcgatgctggatctgcccaccatgtaccggatcctgcgggccttg
ccggacggctgcaggctgctgctcgtcggcgaccccggccagctcccgccgatccagttc
gggctggtgctgcatgcgctgggcgagcggcccgaaatcccgtccgtcgttctgacccgc
gtctaccgccagaccgaggccaccggcattcccgcggtcgccggcgcggtccggtccggc
cggctgccgagcttgccggacaaggcctgcgccagcagcggcggggtggccctgattccc
gccggcgaggtcaccaccgaccagatcgtcgacgtggtggccggcctcggcggcttctcc
gaggacctgcggatcgtctgcgccgtgaaggcgggccccgccggtaccgaggcgctgaac
gcgcgcttccacgacatcttcgcggtcggcaggcgcaggcacccgacccggcgcctggcg
gagggcgagccggtcatgttcctcaagaacgactatcaggccggcctgcgcaacggcagt
ctcggtcggatcaccagcatcgaggaggggagggtcgccgtcgacttcgacggcaccgag
gtcgaactgagcgggtacgggctcgacgacctgacgctggcctacgccatcaccgtccac
aaggcgcagggatcgagcttccggaaggtcgtcatcccggttcagaagacccggctgctc
gaccggtccctgatctacaccgcgatttcgcgcgccaaggattcggcagttcttgtcgga
gccagcgaggtgctgcaacagtcactggaacgggacgcacacgcaggccggagggagacg
gcgttggcgctactgatggagattggaagtcctgagagttga
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