Bradyrhizobium daqingense: LPJ38_25660
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Entry
LPJ38_25660 CDS
T07756
Name
(GenBank) lytic transglycosylase domain-containing protein
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
bdg
Bradyrhizobium daqingense
Brite
KEGG Orthology (KO) [BR:
bdg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bdg01011
]
LPJ38_25660
Enzymes [BR:
bdg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
LPJ38_25660
Peptidoglycan biosynthesis and degradation proteins [BR:
bdg01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
LPJ38_25660
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SLT
Motif
Other DBs
NCBI-ProteinID:
UFS87029
LinkDB
All DBs
Position
5419542..5421731
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AA seq
729 aa
AA seq
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MNQCLRSLACVVTVAAMAFLPTELVAKSSHKSSAPKKTHEAKAGKPRHAAAGKARHGKHA
EAKRKSKKTVDEPSAKPAPPPLTGDLAALRDAIDLARRGKTEDATAARDRIADPAGQKLA
DWYMLRHSESTANFKRYAAFLAANPDWPSSALLRRRAEARLWQEKSDGATVHKFTMDRPT
SAKGKFALARVLLTEGETDRAARLVREAWRADELSERSEEDSYAAFRDLLSADDHRARMD
KRLGAKDYDGARRAAKRLGEDALAIVKACAAVTGKSSKAKDYLEDVPAQERRDLGYVLCR
AQWHLQNDRIDDAAELILAALPDTMAAQDTDAWWRERRMLARKLLDQGKSKTAYDVVRTA
AVPEKEVYRVDYHFMCGWIALRYLDDPKTAMVHFASIDAGSPNPIALSRAHYWRGRAAEA
MGAAADARMSYRAAARYHTAYYGQLARAKLGLDGIELRPPSPVLAGADTPSADDRVRAAN
MLYDLGERDVVFYYAEDFAKESTDAAALEALGELARQRNDARVMLEIGKSALARGLALDH
YAFPTIGIPEHKQVAPAIETSVIYSVARTESSFDQRDKSHANAVGLMQVTPEAGRDTAKR
FGLTYDWGRMVSDPVYNTQMGAAELSALFSEYRGNQIMTFAGYNAGRGRVREWVQARGDP
RDPKVDPVDWVERIPLSETRNYVQRVMENVLVYRARFEDSGMIAGKSDQRVVTKEAGATA
PVAAAAPAP
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagtgcctacgctcgctcgcgtgtgtcgtgaccgtggccgcgatggcctttctt
cccaccgagctcgtggcgaagagcagtcacaaatcatctgcaccgaagaagacgcatgag
gcgaaagccggcaagccgcgtcacgctgccgccggcaaagcgcggcacggcaagcatgcc
gaggccaagcgcaaatcgaagaagacggtcgacgagccctcggccaagccggcaccgccg
ccgctgaccggcgatcttgccgcgctgcgggatgcgatcgacctcgcgcgcaggggcaag
acggaggatgcgaccgccgctcgcgaccgcatcgcggatcccgccgggcagaagctcgcg
gactggtacatgctgcggcactccgagagcacggcgaatttcaaacgctatgccgccttc
cttgccgccaatccggactggccgagcagcgctctcttgcgccgccgcgcggaggcgcgg
ctgtggcaggagaagagcgacggggccaccgtgcacaaattcaccatggaccggccgacc
agcgccaagggcaagttcgcactggcccgcgtgctgctcacggaaggcgagaccgacagg
gccgcccgtctcgtgcgcgaggcctggcgcgcggacgagctgtcggagcggagcgaagaa
gattcctacgccgcgttccgcgatcttctgtccgccgacgatcaccgcgcgcgcatggac
aagcgcctgggcgccaaggactatgacggtgcaaggcgcgcggccaaacggctcggcgag
gatgcgcttgcgatcgtgaaagcctgcgcggccgtcaccggcaagtcgagcaaggccaag
gactatctcgaggacgtcccggcccaggagcggcgcgatctcggctacgtgctgtgccgc
gcccagtggcatcttcagaacgaccgtatcgacgacgcggccgaattgatcctcgccgcc
ctgcccgacacgatggccgcgcaggacaccgatgcttggtggcgcgagcgccgcatgttg
gcgcgcaagctgctcgaccagggcaagtccaagacggcctatgacgtggtgcgcacggcc
gcggtgccggaaaaggaagtctaccgcgtcgactaccatttcatgtgcggctggatcgcg
ctgcgctatctcgacgaccccaagacggcgatggtgcatttcgcatcgatcgacgcaggc
tcgcccaatccgattgcgctgtcgcgcgcccattattggcgcggccgcgccgccgaggcg
atgggcgcggcggccgacgcgcgcatgagctatcgggcggcggcgcgctaccacaccgcc
tattatggccagctcgcccgcgccaagctcggcctcgacggcatcgagctgcgtccgccc
tcgcccgtgctggccggcgccgacacgccgtcagcggacgaccgcgtgcgcgcggccaac
atgctctacgatctcggtgagcgcgatgtcgtgttctattatgccgaggatttcgccaag
gagagcaccgacgccgcagcgctggaagcgctcggcgagctcgccaggcagcgcaacgat
gcgcgcgtgatgctggagatcggcaagtcggccctggcgcgcgggctcgcgctcgaccac
tacgccttccccaccatcggcattcccgagcacaagcaggtcgcgcctgccatcgagacc
agcgtgatctattcggtggcgcgcaccgaaagctcgttcgatcagcgcgacaagtcgcac
gccaacgcggtcggcctgatgcaggtgacgccggaagcgggccgcgataccgccaagcgc
ttcggcctgacctatgactggggcaggatggtctccgatcccgtctacaacacgcagatg
ggagccgccgagctcagcgcgctgttctcggaatatcgcggcaaccagatcatgaccttc
gccggctacaatgccggccgcggccgcgtgcgcgaatgggtgcaggcgcgcggcgacccc
agagacccgaaggtggacccggtcgactgggtcgagcgcattccactgtcggagacccgc
aactacgtccagcgcgtgatggagaacgtgctggtctaccgcgcccggttcgaagacagc
ggcatgatcgccggcaagagcgaccagcgcgtggtgacgaaggaggccggcgccaccgca
cccgtggcggccgcagcacccgctccctag
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