Bradyrhizobium daqingense: LPJ38_26340
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Entry
LPJ38_26340 CDS
T07756
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
bdg
Bradyrhizobium daqingense
Brite
KEGG Orthology (KO) [BR:
bdg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bdg03032
]
LPJ38_26340
03036 Chromosome and associated proteins [BR:
bdg03036
]
LPJ38_26340
03400 DNA repair and recombination proteins [BR:
bdg03400
]
LPJ38_26340
DNA replication proteins [BR:
bdg03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LPJ38_26340
Chromosome and associated proteins [BR:
bdg03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
LPJ38_26340
DNA repair and recombination proteins [BR:
bdg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
LPJ38_26340
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
Spectrin_1st_PEPL
Motif
Other DBs
NCBI-ProteinID:
UFS87152
LinkDB
All DBs
Position
5566688..5567017
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AA seq
109 aa
AA seq
DB search
MAKKDLAKKDSAKKAAAPATVTLKHLAADIAESQDLSKKRAEAVLTDMVELITKHLKRGD
RVRIVGLGILQVRKRAARTGRNPSTGEAIHIKASKKVAFRPVKELKEAI
NT seq
330 nt
NT seq
+upstream
nt +downstream
nt
atggctaagaaggatttggctaagaaggattcggcgaaaaaggcagccgcgcccgccacc
gtcacgctcaagcacctcgccgccgacatcgcggagagccaggacctgtcgaagaagcgc
gccgaggccgtcctgaccgacatggtcgagctgatcaccaagcacctcaagaggggtgac
cgcgtccgcatcgtcggcctcggcatcctccaggtccgcaagcgcgcggcccggaccggc
cgcaatccctccaccggcgaggccatccacatcaaggccagcaagaaggtcgcgttccgc
ccggtcaaggaactgaaagaggcgatctag
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