Bradyrhizobium daqingense: LPJ38_27210
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Entry
LPJ38_27210 CDS
T07756
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
bdg
Bradyrhizobium daqingense
Pathway
bdg00260
Glycine, serine and threonine metabolism
bdg00460
Cyanoamino acid metabolism
bdg00630
Glyoxylate and dicarboxylate metabolism
bdg00670
One carbon pool by folate
bdg00680
Methane metabolism
bdg01100
Metabolic pathways
bdg01110
Biosynthesis of secondary metabolites
bdg01120
Microbial metabolism in diverse environments
bdg01200
Carbon metabolism
bdg01230
Biosynthesis of amino acids
bdg01240
Biosynthesis of cofactors
bdg04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
bdg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
LPJ38_27210
09102 Energy metabolism
00680 Methane metabolism
LPJ38_27210
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LPJ38_27210
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
LPJ38_27210
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
LPJ38_27210
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
LPJ38_27210
Enzymes [BR:
bdg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
LPJ38_27210
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Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Poly_A_pol_cat
Motif
Other DBs
NCBI-ProteinID:
UFS87310
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Position
complement(5728434..5729732)
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AA seq
432 aa
AA seq
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MTSAKTASAPDTFFTASLEQADPEIAAAIKGELGRQRHEVELIASENIVSRAVLEAQGSV
MTNKYAEGYPGARYYGGCEWVDVAENLAIDRAKKLFGAKFANVQPNSGSQMNQAVFLALL
QPGDTFMGLDLAAGGHLTHGSPVNMSGKWFKAVHYTVRREDQIIDMDAVAKQAEEVKPKL
IVAGGSAYSRAWDFKRFREIADSVGAYLLVDMAHFAGLVAGGVHASPVPYAHVTTTTTHK
SLRGPRGGLILTNDEVLAKKLNSAIFPGLQGGPLMHVIAAKAVAFGEALRPDFKVYAKNV
VENAKALAEAMKGHGFDIVSGGTDNHLMLVDLRPKGLKGNVSEKALVRAAITCNKNGIPF
DPEKPFVTSGLRLGTPAATTRGFGVAEFQQVAGMIAEVLNAIAQSDDGKAPLVEAAIKER
VKALTDRFPIYQ
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgacctcagccaagaccgcctccgcgcccgatacgtttttcaccgcctcgctcgagcag
gccgatccggaaatcgccgccgccatcaagggcgagctgggccggcagcgccatgaggtc
gagctgatcgcctccgagaacatcgtcagccgggccgtgctggaagcgcagggttcggtc
atgaccaacaagtatgcggaaggctatccgggcgcgcgctactatggcggttgtgagtgg
gtcgacgtcgccgagaacctcgcgatcgatcgcgccaagaagctgttcggcgccaaattc
gccaatgtgcagccgaactccggcagccagatgaaccaggcggtgttcctggcgctcctc
cagcccggcgacaccttcatgggcctcgacctcgcagccggcggtcatctcacccatggc
tcgcccgtcaacatgagcggcaagtggttcaaggccgtgcactacaccgtgcgccgcgag
gaccagatcatcgacatggacgcggtcgccaagcaggccgaagaggtcaagccgaagctg
atcgtcgcgggcggttcggcctattcgcgggcctgggacttcaagcgcttccgcgagatc
gccgacagcgtcggcgcctacctcttggtcgacatggcgcatttcgccggcctcgtcgcc
ggcggcgtgcatgcctcgcccgtgccctatgcccacgtcaccacgacgacgacgcacaaa
tcgctgcgcggtccgcgcggcggcctgatcctcaccaacgacgaggtgctcgccaagaag
ctcaactcggcgatcttcccgggcctgcagggcggcccgctgatgcatgtgatcgcggcg
aaggcggtggccttcggcgaggcgctgcgtccggacttcaaggtctatgccaagaacgtc
gtcgagaacgccaaggcgctggccgaggcgatgaagggccacggcttcgacattgtctcc
ggcggcaccgataaccatctgatgctggtcgacctcaggccgaagggcctgaagggcaac
gtctcggagaaggcgctggtccgcgccgccatcacctgcaacaagaacgggattccgttc
gaccccgaaaagcctttcgtcacctcgggcctgcgtctcggcaccccggctgcgacaacg
cgcggcttcggtgtcgcggaattccagcaggtcgccggcatgatcgccgaagtcctcaac
gcgatcgcgcagtccgacgacggcaaggcgccgctggtcgaagccgcgatcaaggaaagg
gtcaaggcgctcaccgaccggttcccgatctatcagtaa
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