Bradyrhizobium daqingense: LPJ38_27235
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Entry
LPJ38_27235 CDS
T07756
Symbol
hemB
Name
(GenBank) porphobilinogen synthase
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
bdg
Bradyrhizobium daqingense
Pathway
bdg00860
Porphyrin metabolism
bdg01100
Metabolic pathways
bdg01110
Biosynthesis of secondary metabolites
bdg01120
Microbial metabolism in diverse environments
bdg01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
bdg00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
LPJ38_27235 (hemB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bdg04147
]
LPJ38_27235 (hemB)
Enzymes [BR:
bdg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
LPJ38_27235 (hemB)
Exosome [BR:
bdg04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
LPJ38_27235 (hemB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ALAD
Motif
Other DBs
NCBI-ProteinID:
UFS87314
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All DBs
Position
5732358..5733419
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AA seq
353 aa
AA seq
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MAIKYGRPIELREVARREGTAVPHALDLTVRPRRNRKAEWARRMVRENVLTTDDLIWPLF
LIDGTNKREQVASMPGIDRLSVDQAVREAERAMKLTIPCLALFPYTDPSLRDEEGSEATN
PNNLVCQAVRAIKKEFPEIGILCDVALDPFTSHGHDGLISDGKILNDETVAVLVRQALVQ
AEAGCDIIAPSDMMDGRVAAIREGLDRAGLLDVQIMAYAAKYASAFYGPFRDAIGSAKTL
TGDKRTYQMDSANTDEALREVELDIAEGADMVMVKPGMPYLDVVRRVKDTFAMPTFAYQV
SGEYAMIAAAANNGWLDGERAMMESLLAFKRAGADGVLSYFAPKAAEKLRSQG
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcaaatacggacgtccgatcgaactgcgcgaggtcgcgcgccgggaaggcacg
gcggtgccccacgccctcgatctgaccgtccgtccgcgccgcaatcgcaaggccgaatgg
gcccggcggatggtgcgcgagaacgtgctcaccaccgatgatctgatctggccgctgttc
ctgatcgacggcaccaacaagcgcgagcaggtcgcctcgatgccgggcatcgaccgtctc
agcgtcgaccaggccgtgcgcgaagccgagcgcgccatgaagctcaccatcccctgcctc
gcgctgtttccctacaccgacccgtccttgcgcgacgaggaaggctcggaagccaccaac
ccgaacaatctggtctgccaggcggtgcgtgcgatcaagaaggaatttccggagatcggt
attctctgcgatgtcgcgctcgatcccttcaccagccacggccatgatggcctgatctcg
gacggcaagatcctcaatgacgagacggtcgccgtgctggtgcgtcaggcgctggtgcag
gccgaggccggatgcgacatcatcgcgccctccgacatgatggacggccgcgtcgccgcg
atccgcgaaggcctggaccgcgccggcctgctcgacgtccagatcatggcctatgccgcc
aaatacgcctccgccttctacggcccgttccgcgacgccatcggctcggccaagacgctc
acgggcgacaagcgcacctatcagatggatagcgccaacaccgacgaagccctgcgcgag
gtcgagctcgacatcgccgagggtgccgacatggtgatggtgaagccgggcatgccgtat
ctcgacgtggtccgccgcgtgaaggacacctttgccatgccgaccttcgcctaccaggtc
tccggcgaatacgcgatgatcgccgccgccgccaataacggctggctcgacggcgagcgc
gccatgatggaaagcctgctcgccttcaagcgcgccggcgcggacggcgtgctcagctat
ttcgcgccgaaggccgcggagaagctgcgcagccaggggtaa
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