Bradyrhizobium daqingense: LPJ38_28175
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Entry
LPJ38_28175 CDS
T07756
Name
(GenBank) DNA photolyase family protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
bdg
Bradyrhizobium daqingense
Brite
KEGG Orthology (KO) [BR:
bdg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bdg03400
]
LPJ38_28175
Enzymes [BR:
bdg01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
LPJ38_28175
DNA repair and recombination proteins [BR:
bdg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
LPJ38_28175
Prokaryotic type
LPJ38_28175
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Usp
Motif
Other DBs
NCBI-ProteinID:
UFS92880
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Position
5925384..5926775
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AA seq
463 aa
AA seq
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MSDHPALHAAARSGSPVLCLYVLDETTGRAPGGAARWWLAQSLRALGAEIAARGGSLILR
RGSAARVIPEVVRECGARAVHWNAIAQAPHQAVERQLEAALAKLGTDSQSFPGDLLVPPL
AIRNKEGRGLRVFTPFWRRVLALGDPPKPLPVPKELRPPAKIASDRLESWKLEPLKPDWA
GGLRENWTPGEAAARARLRDFLERTARLYVGDRDRPDRDGTSRLSPHLRFGELSPRQVWH
AARFAAAEDPALGHGVEKFLTELGWREFCRHLLYDHPDLATQNLQRNFDGFPWKPDKKAL
AAWRRGRTGYPIVDAGLRELWHTGVMHNRVRMVVASFLVKQLLIDWREGEAWFWDTLVDA
DAGSNPVNWQWVAGCGADAAPYFRVFNPQLQGEKFDPDGTYVRRWVPELKDLPAKLIHQP
WRATPIELAGAGLTLGKTYPQPIVDHARGRERALAAYANIRKG
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
ctgtccgaccatcccgccctccatgccgccgccaggtccggatcgccggtgctttgcctc
tatgtgctggacgagacgacagggcgagcgccgggtggggcggcgcgctggtggctggcg
cagtccctgcgggcgctcggggccgagatcgccgcgcgcggcggttcgctaatcctgcgc
aggggatcggcagccagggtgattcccgaagtcgtgcgagagtgtggcgcccgcgccgtc
cactggaacgcgattgcgcaggcgccgcatcaagcggttgaacgacagctcgaagcggcg
ctggcaaagcttggaacggactcgcaaagttttcccggcgatctgctcgtcccgcccctg
gcgatccgcaacaaggaaggccggggcctgcgcgtgttcacaccgttctggcggcgtgtg
ctggcgctgggtgatccgccaaagcccctgcccgtaccgaaggagctgcgcccgccagca
aagatcgccagcgatcgactggagagctggaagctcgagccgctcaagccggattgggcg
ggcggcctacgggagaactggacgcccggcgaagccgccgcccgcgcgcgcctgcgcgac
ttcctcgagcgcaccgcgcgcctctatgtcggcgaccgcgatcgcccggaccgggacggc
acctcacggctatcgccgcatctgcgcttcggcgagctcagcccgcgccaggtctggcac
gccgcgcgcttcgccgcggcggaagatccggcactcggccatggggtcgagaaattcctg
accgagctcggctggcgcgaattctgccgccacctcctctacgaccaccccgacctcgcc
acccagaatctgcaacggaacttcgatggcttcccctggaagcccgacaagaaggcgctc
gctgcctggcggcgcggccgcaccggctatcccatcgtcgatgccggcctgcgcgagctc
tggcacaccggtgtgatgcacaaccgggtgcggatggtggtggcctcgttcctcgtcaag
cagctcctgatcgactggcgcgagggcgaagcctggttctgggacacgctggtcgatgcg
gacgccggcagcaatcccgtcaattggcaatgggtcgccggctgcggcgccgacgccgcc
ccctatttccgcgtgttcaatccgcagctccagggcgagaagttcgatccggatggaacc
tacgtccggcgctgggtgccggagctgaaggaccttccggcgaagctgatccaccagccg
tggcgggcgacgccgatcgagcttgcgggtgcaggcctcacgcttggcaagacttatccg
cagcccattgtcgatcatgccaggggacgcgagcgcgcgctcgccgcctacgcgaatatc
cgcaaaggttga
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