Bradyrhizobium daqingense: LPJ38_31815
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Entry
LPJ38_31815 CDS
T07756
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
bdg
Bradyrhizobium daqingense
Pathway
bdg00061
Fatty acid biosynthesis
bdg00071
Fatty acid degradation
bdg01100
Metabolic pathways
bdg01212
Fatty acid metabolism
bdg02024
Quorum sensing
bdg04146
Peroxisome
Module
bdg_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
bdg00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
LPJ38_31815
00071 Fatty acid degradation
LPJ38_31815
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
LPJ38_31815
09145 Cellular community - prokaryotes
02024 Quorum sensing
LPJ38_31815
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
bdg01004
]
LPJ38_31815
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bdg04147
]
LPJ38_31815
Enzymes [BR:
bdg01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
LPJ38_31815
Lipid biosynthesis proteins [BR:
bdg01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
LPJ38_31815
Exosome [BR:
bdg04147
]
Exosomal proteins
Exosomal proteins of breast milk
LPJ38_31815
Exosomal proteins of breast cancer cells
LPJ38_31815
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
DUF764
Motif
Other DBs
NCBI-ProteinID:
UFS88177
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All DBs
Position
6651289..6653220
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AA seq
643 aa
AA seq
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MMDYAGRVAQADTYPKMLRLNAQEHGSEIALREKDLGLWRIFTWNDYQRRVRDFALGLVE
LGLGRGDVIGIIGDNRPDWVAAEIATHAIGGLSLGLYRDVLDEEASYLLTYGEAQLVFAE
DEEQVDKLLALAERVPKLKHIIYSDPRGMRKYDDPRLMSAEKFAELGRARATREPELYDR
LVDATKGEDVAILCTTSGTTSHPKLAMLAAGRVLGHCATYLAFDPKGPDDEYVSVLPLPW
IMEQVYVLGKGLLCRMKINFVEEPDTMMNDLREIAPTFVLFAPRVWESIAADVRAKVMDA
TPFKQRLFDIGMKSGLAALAEGKRSGFADAILFRALRDRLGFTRLRSAATGGAALGPETF
KFFQAMGVPLRTLYGQTELLGAYTLHPEGKVDPDTTGVPMADSVEIRIDNADVHGVGEIV
VRHPNMFLGYYKNPEASVADIKDGWMLSGDAGYFNENRQLVVIDRIKDLAETSRGERFSP
QFIENKLKFSPYIAEAVVLGAGRDALAAMICIRYSIISKWAEKNRLSFTTYSDLASRPEV
YALLRKEVETVNATLPPAQRISRFLLLYKELDADDGELTRTRKVRRSVINEKYAGIIDAI
YRGDADIPVDTVIRFQDGTTQRVRTTLRVVDLREHGHMAEAAE
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgatggattatgcagggcgcgtcgcgcaggccgacacctatcccaagatgctccggctc
aacgcccaggagcatggcagcgagatcgcgctgcgcgagaaggatctcgggctctggcgc
atcttcacctggaacgactatcagaggcgggtacgcgatttcgcactcgggctcgtcgag
ctcggtcttggccgcggcgacgtcatcggcatcatcggcgacaaccggccggactgggtc
gcggcggaaatcgcgacacatgcgatcggcggcctcagccttggtctctatcgcgacgta
ctggatgaagaagcctcctatctcctgacctatggcgaggctcaactcgtcttcgccgag
gacgaggagcaggtcgacaagctgctcgcgcttgccgagcgcgtgccgaagctgaagcac
atcatctattccgatccgcgcggcatgcggaaatacgacgatcccaggctgatgtcggcg
gagaaattcgccgagctcggccgggcgcgggccacgcgggagccggagctttacgatcgc
cttgtcgacgcgaccaagggcgaggatgtcgcgattctctgcacgacctcgggtaccacc
tctcatcccaagcttgcgatgctcgccgccggccgcgtgctcggccattgcgcgacctat
ctcgccttcgatcccaaggggcccgacgacgaatatgtctcggtgctgccgctgccctgg
atcatggaacaggtctacgtgctcggcaaaggcctgctctgccggatgaagatcaacttc
gtcgaagagcctgatacgatgatgaacgatctgcgcgagatcgcgccgaccttcgtgctg
ttcgcgccgcgtgtctgggaatcgatcgccgccgatgtccgcgccaaggtgatggacgcg
acgcccttcaagcagcgcctgttcgacatcggcatgaagtcgggtctggccgcgctcgca
gagggcaagcgctccggctttgccgacgccatcctgttccgcgcgctgcgcgaccggctc
ggcttcacccgcctacgctcggccgcgaccggcggcgcggcgctcggccctgagaccttc
aagttctttcaggcgatgggggtgccgctgcgcacgctctacggccagaccgaattgctc
ggcgcctacacgctgcatcccgagggcaaggtcgatcccgatacgacaggcgtgccgatg
gcagacagcgtcgagatccggatcgacaatgccgatgttcacggcgtcggcgagatcgtg
gtgcggcatcccaacatgttcctcggctactacaagaaccccgaggccagcgtcgccgac
atcaaggacggctggatgttgtcgggcgacgccggctacttcaacgagaaccgccagctc
gtcgtcatcgaccgcatcaaggacctcgccgagacctcgcgcggcgagcgcttctcgccg
caattcatcgaaaacaagctgaaattctcgccctacatcgccgaagctgtggtgttgggt
gccggccgcgacgcgctcgcggcgatgatctgcatccgctactccatcatttcgaaatgg
gcggagaagaaccgcctctccttcaccacctacagcgacctcgcctcgcggcccgaggtc
tatgcgctgctccggaaggaggtcgagaccgtcaacgccacgctgccgccggcgcagcgc
atctcgcgcttcctgctgctctacaaggagctcgatgccgacgacggcgagctcacccgc
acccgcaaagtgcgccgcagcgtcatcaacgagaaatacgccgggatcatcgacgcgatc
taccgcggcgatgccgacatccccgtcgacaccgtgatccgcttccaggacggcaccacc
cagcgcgtccgcacgacgctgcgcgtggtcgatctgcgcgaacacgggcacatggctgag
gcggcggaatga
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