Bradyrhizobium daqingense: LPJ38_34555
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Entry
LPJ38_34555 CDS
T07756
Symbol
pcaH
Name
(GenBank) protocatechuate 3,4-dioxygenase subunit beta
KO
K00449
protocatechuate 3,4-dioxygenase, beta subunit [EC:
1.13.11.3
]
Organism
bdg
Bradyrhizobium daqingense
Pathway
bdg00362
Benzoate degradation
bdg00624
Polycyclic aromatic hydrocarbon degradation
bdg01100
Metabolic pathways
bdg01120
Microbial metabolism in diverse environments
bdg01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
bdg00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
LPJ38_34555 (pcaH)
00624 Polycyclic aromatic hydrocarbon degradation
LPJ38_34555 (pcaH)
Enzymes [BR:
bdg01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.3 protocatechuate 3,4-dioxygenase
LPJ38_34555 (pcaH)
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Motif
Pfam:
Dioxygenase_C
PCDO_beta_N
CarboxypepD_reg
SdrD_B
Motif
Other DBs
NCBI-ProteinID:
UFS88694
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Position
complement(7242957..7243739)
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AA seq
260 aa
AA seq
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MNAQAPALQDPRLNRPEPFAPRDGGFFQRDRSIHPPAHAPGYKSSVLRSPRQALLSLESS
VSEITGPVFGHNDLGPLDNDLIRNYAKDGDPVGERTIIHGRVLDETGRGVPSTLVEFWQA
NAGGRYRHKKDTYLAPVDPNFGGCGRALTDETGYYYFRTVKPGPYPWRNYVNSWRPAHIH
FSVFGSGFAQRLITQMYFEGDPLIPVCPILTTIPDKDALDRLVAPLDLNASTPFDSLAYR
FDIVLRGQRSTYFENRSEGN
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcccaggcgccagccttgcaggatccccgcctcaaccgccccgagccgttcgcg
ccgcgggacggcggcttcttccagcgcgaccgctccatccatccgccggcgcatgcgccc
ggctacaaatcctcggtgctgcgctcgccacgccaggcgctgctgtcgctggagagctcg
gtctcggaaatcacggggccggtgttcggccacaacgacctcggcccgctcgacaacgat
ctgatccgcaattacgccaaggatggcgatcccgtcggcgagcgcaccatcatccacggc
cgtgtgctggacgagaccggccgcggcgtgccgagcacgctggtcgagttctggcaggcc
aatgccggcggccgctaccgacacaagaaagacacctatctggcgccggtcgatcccaat
ttcggcggctgcggccgcgcgctcaccgacgagaccggctactattacttccgcaccgtg
aagccaggcccctatccctggcgcaactacgtcaacagctggcggcccgctcacatccat
ttctcggtgttcggctcgggcttcgcgcagcggctgatcacgcagatgtatttcgagggc
gatcccctgatcccggtctgtccgatcctgacgacgatcccggacaaggacgcgctcgac
cgtctcgtggcgccgctcgatctcaacgcatcgacgccgttcgactcgctcgcctaccgc
tttgacatcgtgctgcgcggccagcgctccacctatttcgaaaatcgctccgaaggaaac
tga
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