Bradyrhizobium daqingense: LPJ38_36055
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Entry
LPJ38_36055 CDS
T07756
Name
(GenBank) glycoside hydrolase family 28 protein
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
bdg
Bradyrhizobium daqingense
Pathway
bdg00040
Pentose and glucuronate interconversions
bdg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bdg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
LPJ38_36055
Enzymes [BR:
bdg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
LPJ38_36055
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Motif
Pfam:
Glyco_hydro_28
NosD
Motif
Other DBs
NCBI-ProteinID:
UFS88949
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Position
complement(7592862..7594160)
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AA seq
432 aa
AA seq
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MTKRFRNWALLSILASMVVGPAAKAQDRRTIAEPVAPDTVCDRPVPSGKNDTVSLQEAIE
HCPDGAAVYLGRGEFHSGPLEMKSGVTLWVGRGATLIAIPEPAAYDKGLGQCGRIAEKGD
GCRPFISFSKTRGGGIYGEGIIDGQGGALIGGGAETWWQLARRAQAQGGNQNAPRLIQVD
HAQDITFSGVTLRNAANFHVAMNRVEGATFWALTIDSPADARNTDGIDLGASQDVTITHS
WIRTGDDNVAIKAGDNGSSSHISIIDNYFGWGHGMSIGSEVNSGARDILVRNLTLDGTTS
GLRIKSDVGRGGLVENVTYEYVCLRGNRWPLAFDAKYDPRAQGTRIPVYRQIVLRHVHGD
TGVLLMRGIDERHALDVTLEDVRFANSATWQLEHANVSANHSDVWPPLPGRATQPPLRGS
EVCSKAFRDGNR
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagcgttttcgcaactgggccctattgtccatactcgcctccatggttgtcggc
cccgccgcaaaagcgcaagaccgccggactatcgccgaacctgttgcacctgatacggtc
tgtgatcgccctgtgccttccggcaagaacgatacagttagcctacaggaggccattgaa
cattgccccgatggcgctgcagtttatctcgggcgcggcgagtttcactcaggtccactc
gagatgaaatcgggcgtgaccttatgggtcggacgcggtgcgacactgatcgccatcccc
gaacctgccgcttacgacaagggcctcggacaatgtggtcgcattgcggaaaagggcgac
ggttgccggccattcatcagcttttctaaaacgcgcggcggcggtatctacggagagggc
atcatcgatggtcagggcggcgcgctgatcggcggcggcgcggaaacctggtggcagcta
gcccgccgcgcccaagcccagggcggcaatcagaacgccccacgcttgatccaggtcgat
catgcgcaggatatcacgttctctggtgtcaccttgcgcaacgctgccaattttcatgtc
gcgatgaaccgggttgaaggtgccacgttttgggccctcacgatcgattcgccggcggat
gcccgcaacaccgatggcatcgatcttggcgccagtcaggatgtgaccatcacccacagc
tggatccgtacgggtgacgacaacgtcgcaatcaaggccggcgacaatggttcaagcagc
catatctcgatcattgataattatttcggctgggggcatggcatgtcgatcggcagcgag
gtgaattccggggccagagacatattggtgcgtaatctgacactggatggtacgacgtcg
ggcctgcgcatcaagagcgatgttggtcgaggcggtctggtcgagaacgtgacttatgag
tacgtgtgcctgaggggcaaccggtggccgctggctttcgatgcaaaatatgatccgcgc
gctcaaggcacgaggattccggtctatcggcaaatcgttctccgtcatgtgcatggcgac
actggtgtgctgctgatgcgcggcatagacgagcggcatgccctggacgtgacactcgaa
gatgttcgatttgccaattccgcgacttggcaacttgaacatgcgaacgtcagcgcaaat
cactctgacgtatggcccccgctgcccggacgagctacacaaccgccgctgcgcggatcg
gaggtatgttccaaggcattccgcgacggcaatcggtaa
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