KEGG   Phocaeicola dorei HS1_L_3_B_079: GV66_00125
Entry
GV66_00125        CDS       T03263                                 
Name
(GenBank) RNA polymerase sigma70 factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
bdh  Phocaeicola dorei HS1_L_3_B_079
Pathway
bdh02020  Two-component system
Brite
KEGG Orthology (KO) [BR:bdh00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    GV66_00125
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bdh03021]
    GV66_00125
Transcription machinery [BR:bdh03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     GV66_00125
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 Sigma70_ECF HTH_1 GerE HTH_10 HTH_Tnp_ISL3 HTH_23 HTH_30 HTH_24 Ldh_1_C Muted
Other DBs
NCBI-ProteinID: AII66213
LinkDB
Position
27881..28447
AA seq 188 aa
MPNTAMEATELLKEIQKHDSQQAFRSLYDMYYDRFFRIAFYYLQRDEWAQEVILDVFTTL
WNHRKSQLIPDDFNKYSYILIRNAALNYLEKEQRREASPLENMPEISSSNLSPEEQMMNE
ELFNIYENSLNELPERCRTIFIKVREEKQSYASVAEELNISPKTVDAQLQKAVTRLKEKI
NNYFRNRR
NT seq 567 nt   +upstreamnt  +downstreamnt
atgcccaacacggcaatggaggcaactgaactactcaaagaaatacagaagcatgattcc
caacaggctttccggtctttatacgatatgtattatgaccgtttctttcgtatcgccttt
tattaccttcaacgggatgaatgggctcaagaagtaattttagatgtttttaccacgctt
tggaatcatcgaaaaagtcagcttattcccgatgattttaataagtacagctatatatta
ataagaaatgccgctctgaactatttggaaaaagaacaaaggagggaagcctcgcctctg
gaaaatatgccggaaatatcttcttccaacctttctcctgaagaacaaatgatgaatgaa
gagttatttaacatttatgagaactcactgaatgaattacctgaacgttgccgaacaatc
tttattaaagtccgcgaagaaaaacaaagttatgcttccgttgccgaagaacttaatata
agccctaaaacagtagatgcccagttacaaaaagctgtaacccgactcaaagaaaaaatt
aacaattattttagaaatagacgatag

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