Phocaeicola dorei HS1_L_3_B_079: GV66_00970
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Entry
GV66_00970 CDS
T03263
Name
(GenBank) hypothetical protein
KO
K01730
oligogalacturonide lyase [EC:
4.2.2.6
]
Organism
bdh
Phocaeicola dorei HS1_L_3_B_079
Pathway
bdh00040
Pentose and glucuronate interconversions
bdh01100
Metabolic pathways
bdh01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
bdh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
GV66_00970
Enzymes [BR:
bdh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.6 oligogalacturonide lyase
GV66_00970
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase22
PD40
Tricorn_N
Motif
Other DBs
NCBI-ProteinID:
AII66371
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All DBs
Position
complement(294476..295801)
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AA seq
441 aa
AA seq
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MRKTFLAITLFLAFSKAALAQFGNCTASEMRTYVDSATGNTITMLTDTMKNDRFLYQTDP
MWTADGKYLLFRSSSRGNDKEVESTLPNGEKRKWTPTQIYFIEMATGKIIQATEGPNLGS
AFLANKTNRMFVSRKEKENWNMYVMDLDKFFADVKQGKVGKPSAYETFIGTFPTEMGRPG
GYAVDCNDDYAYITVEREGTEEEKERMMKNAFLPESNQPVKIKPTLCGIRKMNLSTGEVT
KVIDTEFKTGHIQASRFTPGEIVFCNETGGDAHQRMWFCTADGTVFKPLYKETPLDWVTH
ETFATKDFVYFNILGFQPRLRKQASGIVRINLRTDDVELIGQVELEKDRQAIDGQLVGRG
FWHCNASRDNKWAVGDTFGGNVWLINVQTGERHWLVSDTKMKPDHAHPSFSPDGTKVLFQ
SGHFTNGKRLNLMMVDISSFK
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgagaaagacatttttagctattacattatttttagcttttagtaaagccgcattggct
cagtttggaaactgcactgcatcggaaatgcggacttatgtagatagtgcgaccggcaat
actatcactatgttgaccgatacgatgaagaatgaccgttttctttatcagactgatccc
atgtggacagctgatggcaaatatttattgttcaggtcttccagccgtggaaatgacaaa
gaggtagaaagtacgcttcctaacggagaaaaacgtaaatggactcctacacaaatttat
tttattgaaatggccaccggtaagattattcaagctacggaaggaccgaacttgggcagt
gcttttttggctaataaaacgaatcgtatgtttgtcagccggaaagaaaaagaaaactgg
aacatgtatgtgatggacttggataaattctttgccgatgtaaaacaaggaaaagtaggt
aaaccatccgcttatgaaactttcataggcacttttcccacagagatgggacgtccggga
ggatatgctgtggattgcaatgatgattatgcctacataactgttgagcgtgagggtacg
gaagaggaaaaggaacgtatgatgaaaaacgctttcctgcctgaaagtaaccagccggta
aagataaagccaactctttgcggaattcgtaaaatgaatctcagtacaggagaagtaact
aaggttattgatacggaatttaaaacaggccacatacaagccagccgttttactccgggt
gaaattgttttttgtaacgaaaccggtggcgatgcccatcagcgtatgtggttttgcacg
gcagatggaacagtctttaaacctttatataaagaaactccgctagattgggtgactcat
gaaacttttgcaaccaaagattttgtatatttcaatatcttaggatttcagccgcgcctt
cgcaaacaggcaagtggtattgtgcgtatcaatttgcgtacagatgatgtagagttgata
gggcaggtagaattagaaaaagaccgccaagcgattgacggccaattggtaggaagaggt
ttctggcattgtaatgccagccgtgataataaatgggctgtcggagatacttttggaggt
aatgtatggctgattaatgtgcaaaccggagaacgtcattggttggtttcggataccaag
atgaaaccggatcatgcacatcccagctttagtccggatggtacgaaagttcttttccaa
tccggacattttacaaatggaaaaagattaaatttaatgatggtggatatttcatctttt
aaataa
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