Phocaeicola dorei HS1_L_3_B_079: GV66_02400
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Entry
GV66_02400 CDS
T03263
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bdh
Phocaeicola dorei HS1_L_3_B_079
Pathway
bdh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bdh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GV66_02400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bdh03019
]
GV66_02400
03400 DNA repair and recombination proteins [BR:
bdh03400
]
GV66_02400
Enzymes [BR:
bdh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GV66_02400
Messenger RNA biogenesis [BR:
bdh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GV66_02400
DNA repair and recombination proteins [BR:
bdh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GV66_02400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecQ-1-like_HTH
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
HTH_40
HHH
Helicase_Sgs1
zf-CXXC
GTP1_OBG
Motif
Other DBs
NCBI-ProteinID:
AII66636
UniProt:
A0A076IZE2
LinkDB
All DBs
Position
complement(681536..683716)
Genome browser
AA seq
726 aa
AA seq
DB search
MTENINLTDALKKYFGFDTFKGNQEAIIRNLLAGNDTFVLMPTGGGKSLCYQLPSLIMDG
TAIVISPLIALMKNQVDAMRNFSEEDGVAHFINSSLNKSAIDQVKSDILSGKTKLLYVAP
ESLTKEENVDFLKGVKISFYAVDEAHCISEWGHDFRPEYRRIRPIINEIGKAPVIALTAT
ATPKVRMDIQKNLGMQDAQEFKSSFNRPNLYYEVRSKTNNIDRDIIKFIKANPGKSGIIY
CLSRKKVEELAEVLQANGINARAYHAGMDSATRTANQDGFLKEDIDVIVATIAFGMGIDK
PDVRFVIHYDIPKSLEGYYQETGRAGRDGGEGQCITFYSNKDLQKLEKFMQGKPVAEQEI
GKQLLLETAAYAESSICRRKSLLHYFGEEYTEENCGNCDNCLNPKKQVEAQDSLCAVIEA
IIAVKENFKADYIIDILLGKETSEVLAHKHEELEVFGSGMGEEEKMWNAVIRQALIAGYL
SKDVENYGLLKVTPEGHKFLKKPKSFKIVEDNDFEEEEEETPVRGGASCAVDPVLYSMLK
DLRKKLSKKLDVPPYVIFQDPSLEAMATIYPVTLEELQNIPGVGAGKAKRYGQEFCVLIK
KHCEENEIERPEDLRVRTVANKSKLKVSIIQAIDRKVALDDIAVSKGLEFGELLDEVEAI
VYSGTKLNIDYFLEEIMDEDHLNDIYDYFKESTTDKIDDAMDELGDDYTEDEIRLVRIKF
ISEMAN
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgacggagaatataaatttaacggacgcattaaaaaagtattttggatttgatactttc
aaaggtaatcaggaagcgatcatccgtaatctgcttgccggaaatgatacatttgttttg
atgcctacgggcggtggtaaatcgttatgctatcagttgccatcccttatcatggatgga
acagcaatcgttatatctcctttaattgcattgatgaaaaaccaggtggatgccatgcgt
aatttcagtgaggaggacggagtagcacactttattaattcgtcattgaacaaatcggct
atagaccaggttaaatcggatatcctgagcggcaaaaccaaattgctctacgttgctccc
gaatctttgacaaaggaggagaatgtagatttcttgaaaggagtgaagatttcattttat
gcggtggatgaagcacactgtatttcggaatgggggcatgacttccgtccggagtaccgt
cgtatccgtcctattatcaatgaaataggaaaggcgccggtgattgcccttactgctact
gcaactccgaaagtgcgtatggatattcagaaaaatttgggtatgcaggatgcgcaggag
ttcaagtcctctttcaatcgtccgaacctgtattacgaagtgcgctcgaagacaaataat
attgacagggatattatcaagtttatcaaggctaatccaggtaaatcaggtattatctac
tgtttgagccgtaagaaggtggaagaattggctgaagtgcttcaagctaacggaatcaat
gcgcgtgcttatcatgccggtatggattctgctacacgcacagccaatcaagacgggttc
ttgaaagaggatatagatgtgattgtagctaccatcgcttttgggatgggaattgacaaa
cccgatgtgcgctttgtgatacattatgatattccgaaaagtctggaaggttattatcag
gaaacggggagagccggtcgtgacggaggggaaggtcagtgtattacgttctattctaac
aaggacttgcagaagctggagaagtttatgcagggaaagcctgtggcagagcaggaaatc
ggtaaacagttgctgttggaaacagctgcatacgcagagtcttctatatgccgtcgtaaa
tcattgttacattattttggggaagaatatacagaggagaattgtggaaattgtgataat
tgtttaaatcctaaaaagcaagtggaggctcaggattcattatgtgctgtgattgaagca
atcatagcagtgaaagaaaactttaaagcagattatataattgatattcttttgggtaag
gaaacgtcagaagtacttgctcataaacatgaagaactggaagtattcggttcaggcatg
ggagaagaagaaaaaatgtggaatgctgtcatccgtcaggctttgatagcgggttattta
agtaaagacgtagagaattacggtctattgaaggttactcccgaaggacataaattcttg
aaaaaaccgaaatccttcaagattgttgaagataatgatttcgaggaggaggaagaagaa
actccggttcggggaggtgcttcttgtgcagtagaccctgtgctttactctatgttgaaa
gatttgcgtaagaagctgtccaagaaactggatgtgccgccgtatgttattttccaggat
ccttctttggaggcgatggctactatttatccggtgactttggaagaattgcagaatatt
ccgggcgtaggtgctggaaaggcaaaacgttatggccaggagttctgcgtattgataaag
aagcattgtgaggaaaatgaaatagagcgtccggaggatttgcgtgtccgtacagtggcc
aataaatccaaactgaaggtgtccatcattcaggctattgaccggaaggtggccttggac
gacattgctgtgtcaaagggattggagttcggtgaattattggatgaagtagaggctatc
gtttattcggggactaagctgaatattgattacttcctagaggaaattatggatgaagac
catttgaacgatatttatgattacttcaaggaatctacaacagataaaatagatgacgcg
atggatgagctgggtgatgactataccgaggatgaaatccggttggttcgtattaagttt
atttctgaaatggcaaattga
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