KEGG   Phocaeicola dorei HS1_L_3_B_079: GV66_02700
Entry
GV66_02700        CDS       T03263                                 
Name
(GenBank) RNA polymerase sigma70 factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
bdh  Phocaeicola dorei HS1_L_3_B_079
Pathway
bdh02020  Two-component system
Brite
KEGG Orthology (KO) [BR:bdh00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    GV66_02700
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bdh03021]
    GV66_02700
Transcription machinery [BR:bdh03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     GV66_02700
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 GerE DUF2774 HTH_10 LYRM_2 Tnp_IS481_C
Other DBs
NCBI-ProteinID: AII66688
LinkDB
Position
complement(754543..755103)
AA seq 186 aa
MSIDLNAFNKFFIDYQQRFVHFACTYVHDEAVAEDFVVESMMYYWENKDRLSADTNIPAY
VLTTIKHKCIDYLRHQQVYQDASDEIARIYAWELSGRIMTLEDFEPYEVFTKEIQEIVDR
TLDALPEQTRKIFVMSRNENKSHKEIAELLDITTKGVEFHISKATRTLRLALKDYLPVSL
LFFYLH
NT seq 561 nt   +upstreamnt  +downstreamnt
atgagcattgatttgaatgcatttaataaattctttatagactaccagcaacgttttgtc
cactttgcctgtacctatgtgcatgatgaagctgttgccgaagattttgttgtggaatca
atgatgtactattgggagaacaaagatcgtttgtctgctgatactaatattccggcttat
gtcttgaccacgataaagcataagtgtattgactatttgcgccatcaacaagtctatcag
gatgcttctgacgaaatagcccgaatctatgcatgggaattgtcgggcagaatcatgact
ttggaagatttcgagccctatgaggtttttacaaaggaaatacaggagattgttgatagg
acactggatgctttgcccgaacagactcggaaaatctttgtgatgagccgtaatgaaaat
aaatcccataaagaaatagcagaactattggatattacaaccaagggagtggaatttcat
atatcgaaagctaccaggacgttacgtcttgcattgaaggattatctgccggtatcctta
ctttttttctatttgcattaa

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