KEGG   Phocaeicola dorei HS1_L_3_B_079: GV66_03460
Entry
GV66_03460        CDS       T03263                                 
Name
(GenBank) RNA polymerase sigma70 factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
bdh  Phocaeicola dorei HS1_L_3_B_079
Pathway
bdh02020  Two-component system
Brite
KEGG Orthology (KO) [BR:bdh00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    GV66_03460
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bdh03021]
    GV66_03460
Transcription machinery [BR:bdh03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     GV66_03460
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4_2 Sigma70_r4 GerE Sigma70_ECF HTH_24 HTH_23 HTH_40 HTH_3 Crp HTH_36 HTH_Crp_2 DUF2089
Other DBs
NCBI-ProteinID: AII66830
UniProt: A0A0K2HF63
LinkDB
Position
complement(979078..979668)
AA seq 196 aa
MNQYPDFDQKLYDDLRRGKEYAFAAVFERYNRLLYTIAYRFLKSEEEAEDAIQYLFMKLW
EQRTNFSFESGIRSLLFTILKNYILNELRHRSLVFEKLYEMAQQVNDEDEDDFLTQFENG
ELGKFLRVAIDKLPPQKQKICLLKIEYGLSNQEIADRMGITVPTVKSHYTQAIKALRNEI
ESLIIWFPVIWINLIV
NT seq 591 nt   +upstreamnt  +downstreamnt
atgaatcaatatccggattttgatcagaaactatatgacgatcttcgccgtgggaaagaa
tatgcctttgccgctgtttttgaacgctataaccggttattatataccatagcctatcgt
tttttgaagtcagaagaagaggcggaagatgcgattcagtatctttttatgaaattgtgg
gagcagcggacaaattttagctttgagtcgggtatccgtagtttgctatttactatttta
aagaattatatactgaatgaattgaggcatcgtagtttggttttcgagaaactatacgaa
atggcccaacaagtgaatgatgaagatgaagacgactttttgacacaatttgaaaatggt
gaactcggaaaattcctgcgggttgctatagataaacttcctcctcagaaacaaaaaatc
tgcttgttgaaaatagaatatggattatccaatcaggaaatagccgacaggatggggata
actgttcctactgtgaaatcccattacacacaggctataaaagccctccgtaacgagata
gagtctttaattatatggtttcctgtgatatggattaatttaatagtctga

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