Phocaeicola dorei HS1_L_3_B_079: GV66_03645
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Entry
GV66_03645 CDS
T03263
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
bdh
Phocaeicola dorei HS1_L_3_B_079
Pathway
bdh03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bdh00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GV66_03645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bdh03021
]
GV66_03645
03400 DNA repair and recombination proteins [BR:
bdh03400
]
GV66_03645
Enzymes [BR:
bdh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GV66_03645
Transcription machinery [BR:
bdh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GV66_03645
DNA repair and recombination proteins [BR:
bdh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GV66_03645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
NPL
Motif
Other DBs
NCBI-ProteinID:
AII66867
UniProt:
A0A076IVP8
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All DBs
Position
complement(1035106..1036098)
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AA seq
330 aa
AA seq
DB search
MAILAFQKPDKVLMLEADSRFGKFEFRPLEPGFGITVGNALRRILLSSLEGFAINTIKIE
GVEHEFASVPGVKEDVTNIILNLKQVRFKQVVEEFENEKVSITVENSSEFKAGDISKYLT
GFEVLNPELVICHLDSKATMQMDITINKGRGYVPADENREYCTDVNVIPIDSIYTPIRNV
KYQVENFRVEQKTDYEKLVLEITTDGSIHPKEALKEAAKILIYHFMLFSDEKITLETSDV
DGNEEFDEEVLHMRQLLKTKLVDMDLSVRALNCLKAADVETLGDLVQFNKTDLLKFRNFG
KKSLTELDDLLEGLNLSFGTDISKYKLDKE
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcgatattagcatttcaaaaacctgataaagtattaatgttggaagcggactccaga
tttggaaaatttgagttccgtccactcgaacccggtttcggtattaccgtaggtaatgct
ttacgccgtattcttctttcttcattggaaggatttgcaatcaatacgattaagatcgaa
ggtgtagaacatgagttcgcatctgtacctggtgttaaagaagacgtgaccaacattatc
ttaaatctgaagcaagtcagatttaagcaagtagtagaagagttcgaaaatgaaaaggta
agcattaccgttgagaattctagtgaatttaaggcaggtgatataagtaagtatttgact
ggatttgaagtgttaaatcctgaattggttatttgccatttagattcaaaagcaacaatg
cagatggacattactattaataaaggtagagggtatgttccggccgacgaaaaccgcgaa
tattgtaccgatgttaatgtaattcctatcgattctatttacacaccgatacgtaatgta
aaatatcaggtggaaaacttccgtgttgaacagaagactgactacgaaaagctggtattg
gaaattactaccgatggttccattcacccgaaggaagctttgaaagaagccgctaaaata
ttgatttatcatttcatgttgttctctgatgaaaagattactcttgaaacatccgatgtg
gacggcaatgaagaatttgatgaagaagtattgcacatgcgccagctgcttaagactaag
cttgttgatatggacctctcagttcgtgccttgaactgcttgaaagctgccgatgtggaa
acattgggtgacttggtacagttcaacaagacagatctgttgaagttcagaaacttcggt
aagaaatcgctcacggagcttgatgatttgctcgagggtctgaatctgtcgtttgggacc
gatatctctaaatataaattagataaagaataa
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