Phocaeicola dorei HS1_L_3_B_079: GV66_05120
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Entry
GV66_05120 CDS
T03263
Name
(GenBank) ATP-dependent DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
bdh
Phocaeicola dorei HS1_L_3_B_079
Pathway
bdh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bdh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GV66_05120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bdh03400
]
GV66_05120
Enzymes [BR:
bdh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GV66_05120
DNA repair and recombination proteins [BR:
bdh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GV66_05120
RecFOR pathway proteins
GV66_05120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_3
AAA_22
Mg_chelatase
AAA_16
nSTAND3
TsaE
TIP49
AAA_14
NB-ARC
AAA_18
Rad17
NTPase_1
RNA_helicase
ABC_tran
NPHP3_N
AAA_28
AAA_PrkA
AAA_33
bpMoxR
AAA_17
AAA_24
Sigma54_activ_2
NACHT
IstB_IS21
Motif
Other DBs
NCBI-ProteinID:
AII67128
UniProt:
A0A076J1V9
LinkDB
All DBs
Position
complement(1379130..1380158)
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AA seq
342 aa
AA seq
DB search
MEENFDIREQQLTTKERDFENALRPLNFEDFSGQDKVVDNLRIFVKAARLRAEALDHVLL
HGPPGLGKTTLSNIIANELGVGFKVTSGPVLDKPGDLAGVLTSLEPNDVLFIDEIHRLSP
VVEEYLYSAMEDYRIDIMIDKGPSARSIQLELSPFTLVGATTRSGLLTAPLRARFGINLH
LEYYDDDVLTSIIRRSANILNVPCDMKAAGEIASRSRGTPRIANALLRRVRDFAQVKGSG
RIDVEIARFALEALNIDRYGLDEIDNKILCTIIDKFKGGPVGLTTIATALGEDAGTIEEV
YEPFLIKEGFLKRTPRGREVTELAYIHLGRSIYNSQKTLFDD
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaattttgatatacgcgagcaacagctcacaactaaagaacgcgattttgag
aatgccttacgtccgttgaattttgaagattttagcgggcaggataaggtggtagataat
ctgcgcatctttgtcaaggcggcgcgtctgcgggccgaggcgttagaccatgttcttttg
cacggacctcctggcttgggcaagacgaccttaagtaatatcattgccaatgaactggga
gtaggttttaaagtaacctcaggaccggtgctggataaaccgggggatttggcgggagta
ctgaccagcttggaacccaatgatgtgctttttattgatgaaatacatcggttgagccct
gtggtagaagaatatctgtattctgccatggaggattatcgtattgatataatgatagac
aagggaccttcggcgcgtagtatccagttggagctgagtccgtttactttggttggagcc
actaccaggagtgggttgctgactgcgcctttgcgtgcccgttttggaattaatcttcat
ttggagtattatgacgatgatgtattgacaagcattatccgtcgctctgctaatatattg
aatgtgccttgtgacatgaaagcagcgggtgagattgcttcgcgcagccgtggaacgccc
cgtattgcaaatgcgttgttgaggcgtgtccgtgattttgcccaggtgaaaggttccgga
aggattgatgtggaaattgcccggtttgctttagaagccttgaacattgacagatatgga
ctggatgagatagataacaagattttatgtactattatagataagtttaagggaggtcct
gtggggctgactactattgcaaccgctttgggtgaagacgccggaacaatagaggaggtt
tatgaaccttttttgattaaagaaggtttcttaaaacgtactccgcgtggacgtgaggtc
acggaactggcctatatacacttgggacggagcatttataatagtcagaagacattattt
gatgattag
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