Phocaeicola dorei HS1_L_3_B_079: GV66_09005
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Entry
GV66_09005 CDS
T03263
Name
(GenBank) RNA polymerase subunit sigma-70
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
bdh
Phocaeicola dorei HS1_L_3_B_079
Pathway
bdh02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bdh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GV66_09005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bdh03021
]
GV66_09005
Transcription machinery [BR:
bdh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GV66_09005
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
GerE
HTH_11
HTH_24
UPF0122
HTH_AsnC-type
HTH_23
HTH_40
DSBA
HTH_16
Motif
Other DBs
NCBI-ProteinID:
AII67823
LinkDB
All DBs
Position
complement(2275165..2275746)
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AA seq
193 aa
AA seq
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MEEHIENIERHLIHDLKQGSHKAFDKIYQMYSKRLYAYSLQFTKSSEESEEIVQEVFVKL
WSNRINIRQDETLRSLLFIMAKHRLINAYRQKINHPIYEEYIYHIDTLSTEDTHYKLEYN
EFLFRFLKTIEKLPDTQQKVIRLSRFKQLSNKEIAEKLSLSEQTVKNQLSLGLKTLKEKL
NKIWLLLMLLFIN
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
ttggaagagcacatagaaaatatagaacgacacttgattcatgacttaaaacaaggatcg
cataaggcatttgacaaaatttatcaaatgtactccaaacgcctgtatgcttatagttta
caatttaccaaatcttccgaagaatcagaggaaatcgtacaagaggtttttgtaaaactg
tggtctaaccgtataaatataagacaagatgaaacattacgttctctactttttattatg
gctaaacaccgtctcatcaatgcataccgtcagaaaataaaccatcccatatatgaagaa
tacatttatcatatagataccctgtcaaccgaggacactcattacaagctggaatataat
gaattcctattcagattcctcaaaacaatagaaaagctcccagacactcagcaaaaagta
attcgtctatcccggttcaaacagttatccaataaagaaatagcagaaaaactttcttta
agcgaacaaaccgtaaaaaaccagctttcactaggacttaagaccctaaaggagaaatta
aacaaaatatggttacttctaatgttactttttattaattag
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