KEGG   Phocaeicola dorei HS1_L_3_B_079: GV66_09055
Entry
GV66_09055        CDS       T03263                                 
Name
(GenBank) RNA polymerase
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
bdh  Phocaeicola dorei HS1_L_3_B_079
Pathway
bdh02020  Two-component system
Brite
KEGG Orthology (KO) [BR:bdh00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    GV66_09055
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bdh03021]
    GV66_09055
Transcription machinery [BR:bdh03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     GV66_09055
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 GerE PhyR_sigma-like Sigma70_ECF HTH_10 MOLO1 UPF0122 HTH_40 FHIPEP HTH_24 Tnp_IS481_C HTH_20
Other DBs
NCBI-ProteinID: AII67833
LinkDB
Position
2291677..2292264
AA seq 195 aa
MKSTTDIQMSKMPGNSFNDIYTSYYKKSFFFAKSYVHNDLAAEDIASEALIKLWEKLKAE
PVEEKYILPLLLAILKNKALDYLKHEEVKRSAFEVMADWQQQELSIRMSALEACNPDEIF
SEEVEKIISATLSTLSEQTRRAFILSRFENKSNKEIAEEMEISIKGVEYHISKALKVLRV
TLKDYLPLFYFFFYY
NT seq 588 nt   +upstreamnt  +downstreamnt
atgaaaagcacaaccgatatacaaatgagcaaaatgcctggaaattcttttaatgatatc
tatacctcttattataagaagtcttttttctttgccaaatcatacgttcataatgatttg
gcagcagaagatattgcctccgaggcattaataaagttgtgggaaaagttgaaggccgag
cctgttgaagagaaatatatcttaccgttgttactggcaattttgaagaacaaggctttg
gactatctaaagcacgaggaggtaaaacgcagtgcttttgaagtgatggccgactggcaa
caacaggaattgtctatccgtatgtctgccttggaagcgtgcaatcctgatgagattttt
tcggaagaagtggaaaaaatcatcagtgctactttaagcactttgtcggaacagacgcga
cgggcgtttattttgagccgttttgaaaataaatctaataaagagattgccgaagagatg
gaaatctctataaagggggtggaatatcatatatcaaaagcattgaaagtactgcgggtg
actttaaaagattatcttcctttattttatttcttcttttattattaa

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