Phocaeicola dorei HS1_L_3_B_079: GV66_09055
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Entry
GV66_09055 CDS
T03263
Name
(GenBank) RNA polymerase
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
bdh
Phocaeicola dorei HS1_L_3_B_079
Pathway
bdh02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bdh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GV66_09055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bdh03021
]
GV66_09055
Transcription machinery [BR:
bdh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GV66_09055
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
GerE
PhyR_sigma-like
Sigma70_ECF
HTH_10
MOLO1
UPF0122
HTH_40
FHIPEP
HTH_24
Tnp_IS481_C
HTH_20
Motif
Other DBs
NCBI-ProteinID:
AII67833
LinkDB
All DBs
Position
2291677..2292264
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AA seq
195 aa
AA seq
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MKSTTDIQMSKMPGNSFNDIYTSYYKKSFFFAKSYVHNDLAAEDIASEALIKLWEKLKAE
PVEEKYILPLLLAILKNKALDYLKHEEVKRSAFEVMADWQQQELSIRMSALEACNPDEIF
SEEVEKIISATLSTLSEQTRRAFILSRFENKSNKEIAEEMEISIKGVEYHISKALKVLRV
TLKDYLPLFYFFFYY
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagcacaaccgatatacaaatgagcaaaatgcctggaaattcttttaatgatatc
tatacctcttattataagaagtcttttttctttgccaaatcatacgttcataatgatttg
gcagcagaagatattgcctccgaggcattaataaagttgtgggaaaagttgaaggccgag
cctgttgaagagaaatatatcttaccgttgttactggcaattttgaagaacaaggctttg
gactatctaaagcacgaggaggtaaaacgcagtgcttttgaagtgatggccgactggcaa
caacaggaattgtctatccgtatgtctgccttggaagcgtgcaatcctgatgagattttt
tcggaagaagtggaaaaaatcatcagtgctactttaagcactttgtcggaacagacgcga
cgggcgtttattttgagccgttttgaaaataaatctaataaagagattgccgaagagatg
gaaatctctataaagggggtggaatatcatatatcaaaagcattgaaagtactgcgggtg
actttaaaagattatcttcctttattttatttcttcttttattattaa
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