Phocaeicola dorei HS1_L_3_B_079: GV66_09630
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Entry
GV66_09630 CDS
T03263
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bdh
Phocaeicola dorei HS1_L_3_B_079
Pathway
bdh03030
DNA replication
bdh03430
Mismatch repair
bdh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bdh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GV66_09630
03430 Mismatch repair
GV66_09630
03440 Homologous recombination
GV66_09630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bdh03032
]
GV66_09630
03400 DNA repair and recombination proteins [BR:
bdh03400
]
GV66_09630
Enzymes [BR:
bdh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GV66_09630
DNA replication proteins [BR:
bdh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GV66_09630
DNA repair and recombination proteins [BR:
bdh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GV66_09630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
T2SSK
Motif
Other DBs
NCBI-ProteinID:
AII67946
UniProt:
A0A0K2HI22
LinkDB
All DBs
Position
2487847..2491644
Genome browser
AA seq
1265 aa
AA seq
DB search
MQDFVHLHVHTQYSILDGQASIPRLVDKAMADGMKGIAVTDHGDMFGIKEFFNYVNKKNS
STNGEIKDLKKRIAGLEKGTVECDNPEAELVACKEKLEAAKRKLFKPIFGCEMYVARRRL
FNKEGKPDQSGYHLVVLAKNEKGYHNLIKLVSKAWTEGFYMRPRTDRVELEKYHEGLIVC
TACIAGEVPRNIIAGKYEEAEEAIQWYKRVFGDDFYLELQRHKATVPRANHEAYKLQQIA
NEKLIEYSRKFNVKLVCTNDVHFVDEENAEAHDRLICLSTGKDLDDPNRMLYSKQEWMKT
RAEMNEVFADVPEALSNTVDICDQVEFYSIDHAPIMPTFAIPEDFGTEEGYRKKYTEKDL
FDEFTQDENGNVVMSEEAAKAKIEKLGGYDKLYRIKLEADYLKKLALEGAHKRYGEVLNE
EVQERIKFELHIMKTMGFPGYFLIVQDFIRAAREELDVSVGPGRGSAAGSAVAYCLGITK
IDPIAYDLLFERFLNPDRISLPDIDVDFDDDGRGRVLNWVTEKYGQEKVAHIITYGTMAT
KLAIKDVARVQKLPLSESDRLCKLVPDKIPDKKMNLTNAIAYVPELQAAEVSPDPILRDT
IKYAKMLEGNVRNTGVHACGTIICRDDITDWVPVSTADDKETGEKMLVTQYEGSVIEDTG
LIKMDFLGLKTLSIIKEAIENIKHSKGIILDIDEVDISDPPTYALYSEGRTIGTFQFESA
GMQKYLRELEPSTFEDLIAMNALYRPGPMDYIPDFIDRKHGRKPIEYDIPIMEKYLKDTY
GITVYQEQVMLLSRLLADFTRGESDALRKAMGKKLRDKLDHMKPKFIEGGRKNGHDPKVL
EKIWTDWEKFASYAFNKSHATCYSWVAYQTAFLKANYPAEYMAATMSRNISNITEITKLM
DESKATGIMTKGPDVNESYLKFSVNRKGDIRFGLGAIKGVGESAVQSILEERERNGEYKD
IFDFVQRVNLSACNRKNIENLALAGAFDSFTGIKREDFFVKNAKDETFTEVLVRYGNKYQ
MDKAAAANSLFGGENQVDIATPEIIPSPAWGDLERLNKERDLVGIYLSAHPLDEYAVILE
NVCNVHMAELADLTPLQNRDLTMGGIVSAVREGYTKTGKPYGIAKVEDYSGSAEFAFFGN
EWVEKKNFFMTGMFLFMRGKCQPKQWRQEEWEVKISTIELLPEVKEKIIEKLTVSAPLSA
LDEELITEFSALIKANPGNAELYFHVMDEDGQMYVNLMSRTMKISVQKEIMTYLKSQPQL
SYKIN
NT seq
3798 nt
NT seq
+upstream
nt +downstream
nt
atgcaggattttgtccatttacatgtccatacccagtattccatccttgatggccaggcg
tctattccacgtttggtagacaaggctatggctgatggaatgaaaggtatagccgtaaca
gaccatggtgatatgttcggtatcaaggaattcttcaattatgtgaataagaagaatagc
agtactaacggtgagataaaggatttgaagaaaagaatagccggactggaaaaaggtacg
gtggaatgtgataatcccgaggcggaacttgtggcgtgcaaggagaagttggaggcggca
aagaggaaattgtttaaaccgattttcggttgtgagatgtatgtggcacgccgtcgttta
tttaacaaagaaggaaaacccgatcaaagtggttatcacttggtagtgcttgctaaaaat
gaaaaaggataccacaacctcataaaattagtgtcaaaggcatggacggaagggttctat
atgcgtccacgtactgatcgtgtggaattggaaaaataccatgaagggctgattgtttgt
acagcgtgtattgccggagaagtgcctagaaatataatagctggaaaatatgaagaggca
gaggaggctatccaatggtataaacgtgtattcggagatgatttctatttggaattgcaa
cgtcataaagcgacggttcctcgtgcgaatcatgaagcttataaattgcagcaaattgct
aacgaaaagttgatagagtattctagaaaattcaatgtcaagctggtttgtactaatgac
gttcactttgtagatgaagagaatgctgaagcacacgacaggctgatctgtctgagtacg
ggtaaggatttggatgatcctaaccgtatgctctattcaaagcaagagtggatgaagaca
cgtgccgagatgaatgaagttttcgctgatgtccccgaggctctttcaaatacggtggat
atttgtgatcaggtggaattttatagtatagatcatgcaccgattatgcctacttttgct
attcctgaagattttgggacagaagaggggtatcggaagaaatatacagaaaaggacttg
tttgatgagttcactcaagatgaaaacggtaacgtggtaatgagtgaggaggccgccaaa
gccaaaatagagaaactgggtggttatgacaaactctatcgtattaaactggaagctgat
tatctgaagaaattagcgttggaaggtgcgcacaagcgttatggagaagtcttgaatgag
gaagtgcaggaacggatcaaattcgaacttcatattatgaagacgatgggttttccgggt
tacttcttgattgtgcaggattttattcgtgccgcgcgtgaagaattggacgtgtctgta
gggccgggacgtggatcggcggcaggttctgccgtagcatattgtttgggtatcactaaa
attgaccctattgcatatgatttgctgttcgaacgtttcctgaatcccgaccgtatttct
ttgcctgatattgatgtggattttgatgatgatggtcgtggacgagtactgaattgggta
actgaaaaatatggtcaggaaaaggtggcgcatatcattacatatggtacgatggcaacc
aagctagcgatcaaggatgtagcccgtgtacagaaattacctttatcggagtctgaccgt
ttgtgtaagctggttccggataagattcctgataaaaaaatgaatttgactaatgccata
gcttatgttcctgaactacaggcagcggaagtctcacctgatcctattttgcgtgatacg
ataaagtatgcaaagatgttggaggggaatgtccgtaatacaggtgtgcatgcgtgcggt
actattatatgtcgagatgatataacggactgggtgcctgtaagtacggcagatgataag
gaaaccggtgaaaaaatgctggtgactcagtatgaaggttcagttattgaagatactgga
ttgatcaagatggactttttgggtctgaagactctttctattatcaaagaggcgattgaa
aatattaagcatagtaaggggattatcttggacattgacgaggttgacatttcggatcct
cctacttatgctctttatagtgaaggacggacgattggtacattccagttcgaatctgcc
ggtatgcagaaatatttgcgggaattggaacctagtacttttgaggatttgattgcgatg
aatgctctttatcgtccggggcctatggattatattccggactttatcgaccgtaagcat
ggccgtaagcctattgagtatgatattcctattatggagaaatatttgaaagatacatat
ggtattacggtatatcaggagcaggtcatgcttttatcacgtttgttggcggatttcact
cgtggcgaatccgatgccttgcgtaaagcaatgggtaaaaaactaagagataaactagac
catatgaagcctaagtttattgaaggcggacgaaagaacggtcatgatcccaaagtactt
gagaagatttggacggactgggaaaagtttgcttcttatgcattcaataaatctcatgct
acttgttattcatgggtggcttatcagactgcttttctgaaagcaaactatcccgcggaa
tatatggcagctacgatgagccggaatatttcgaatatcacggaaattactaaattgatg
gatgagagtaaggcgactggcatcatgaccaagggacccgatgtgaatgaaagttatctg
aagttttctgtgaaccgtaaaggggatatccgttttgggctgggagccattaagggagtg
ggggaaagtgctgtgcagtctatccttgaagaacgtgagagaaatggagaatataaagat
attttcgattttgtacagcgtgtaaatctttcggcttgtaatcgtaagaatatagaaaac
ttggctttggcaggtgcttttgatagtttcacgggaataaagcgtgaagacttctttgta
aagaacgctaaggatgaaacctttaccgaagttttggtacgttatggaaataagtatcag
atggataaagccgcagctgcaaattctttgtttggaggtgagaatcaagtggatattgct
actcccgaaatcattccgtctcctgcatggggggatttggaacgtttgaataaagaacgt
gatttggtaggtatctatctttctgcccatccgttggatgagtatgctgttatattagag
aatgtatgtaatgtccacatggcggaacttgccgatttaacccctttgcagaacagagac
ttaaccatgggggggattgtgagtgcagtgcgtgagggatataccaagacgggaaaacca
tacggtattgctaaagtggaagattattcgggttcagcggaatttgctttcttcggtaat
gaatgggtagagaagaagaacttttttatgactggtatgtttttatttatgcgagggaaa
tgtcagccaaaacaatggcggcaggaagaatgggaggtgaagataagtactattgaatta
ttaccagaagtaaaggaaaagattattgagaaacttacagtttcagctcctttgtctgca
ttggatgaagagctgataacggagttttcagccttaatcaaggcaaatcccggtaatgca
gagctttattttcatgtaatggatgaggatggacaaatgtatgtcaatctgatgtcacgt
actatgaagatttcggttcaaaaagagatcatgacttatttaaagagccaaccacagctc
tcttacaaaattaattag
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