Phocaeicola dorei HS1_L_3_B_079: GV66_10195
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Entry
GV66_10195 CDS
T03263
Name
(GenBank) RNA polymerase sigma 70
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
bdh
Phocaeicola dorei HS1_L_3_B_079
Pathway
bdh02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bdh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GV66_10195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bdh03021
]
GV66_10195
Transcription machinery [BR:
bdh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GV66_10195
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
GerE
Sigma70_r2
Otoancorin_N
HTH_24
HTH_40
HTH_30
HTH_10
Sigma70_ECF
HTH_VMAP-M9
HTH_23
DUF2089
TnsD
PhyR_sigma2
Mga
Motif
Other DBs
NCBI-ProteinID:
AII68053
LinkDB
All DBs
Position
complement(2610885..2611469)
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AA seq
194 aa
AA seq
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MNNNARKYNRYNEVDERILALFAENKEKAFRLLYDTYYLPLCLYSVQFTGSTETSEDIVQ
NLFVSFWDKNSHTTISSNLHAWLFNAVRFSSLTKVQRERYFSLDEMEEESYSPIDDFYDE
EELLQKRNQLLTELKKLPEQEYNVLVKIVLEDKKYKEVAEELHISVNTVKTHLSRALKML
RRFNMIEILILFNL
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgaacaataatgcaagaaaatacaatagatataatgaagtagacgaaaggatactagct
ctctttgctgaaaacaaagaaaaggcctttcgtctactgtatgatacttattatctccct
ttatgcctctactctgtacaattcacaggctctacggaaacttcagaagatattgtacag
aatctatttgtcagtttttgggacaaaaactcacataccaccatttcctccaatctgcac
gcatggttgttcaatgccgtccgtttctcttcactgacaaaagtgcagcgagaacgttac
ttttctttagacgaaatggaagaagaatcttattctcctatcgatgacttttatgatgag
gaagaactattgcaaaaaagaaaccagctactgactgaattaaaaaaattgccagaacaa
gagtacaatgttctagtcaaaattgttctggaagataaaaagtacaaagaagtagctgaa
gagctccatatttccgtaaatacagtaaaaacccatctatcacgcgcactaaaaatgttg
cgtcgtttcaatatgatagaaattctaatcttatttaatttataa
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