Brachypodium distachyon (stiff brome): 100821076
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Entry
100821076 CDS
T01717
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH14
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bdi03400
]
100821076
Enzymes [BR:
bdi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
100821076
DNA repair and recombination proteins [BR:
bdi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
100821076
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
DExH14_plug
ResIII
Helicase_C
AAA_22
T2SSE
AAA_30
AAA_19
DEXQc_Suv3
PhoH
IstB_IS21
Motif
Other DBs
NCBI-GeneID:
100821076
NCBI-ProteinID:
XP_014752424
UniProt:
A0A0Q3KEM8
LinkDB
All DBs
Position
1:68728225..68749103
Genome browser
AA seq
2084 aa
AA seq
DB search
MLAPLPRLTCSLRAHFDADQAYLLRKAVLQARIPPRPHDEWELARRIVPNWDDAPSDVRQ
AYKQFIGAVVELLNGEVVSEEFQQVAQSVYRLFGGNVAQFGAAAKSLEKRNELESLVGYS
VQESVLKKLAQFAQKLHSLQGVSIQEFVQEDKKDAAGDDTSEFGASFDFKAPSRFIIDVT
LDDDLPFGSGVLIPFENELDDACSTSINCNSTASGGSVNLRWLKDQCDLITRSGGSMLSG
DELAMALCRVLRSHKAGDEIAGELLDLVGDAAFEIVQDLLSHRKELGDAIQHGLTILKSE
KLSSSNQPKMPSYGTQVTVQTEYERQLEKSKRKEGRRAKRGAEHGTNDIGADDFSSLLLA
SERKQPFDDMIGTGEGESSFTVTSLPQGTTRKHMKGYEEVKIPPTPTAPLRPNEKLIEIR
ELDDIAQAAFQGYKSLNRVQSRIFQATYNTNENILVCAPTGAGKTNIAMIAVLHEVKQHF
REGILHKNEFKIVYVAPMKALAAEVTATFGRRLSPLNLVVRELTGDMQLTKNEIEETQMI
VTTPEKWDVITRKSSDMSLSMLVKLIIIDEVHLLNDDRGSVIETLVARTLRQVESMQSMI
RIVGLSATLPTYLEVAQFLRVNADTGLFYFDSSYRPVPLAQQYIGITERDYAKKNELFNS
LCYEKVVEAIKQGHQALVFVHTRKDTGKTARTLIDLAAKSGELELFSNADHPQYSLIKKD
VGKAKSREVVEFFESGFGIHNAGMIRSDRSLMERLFSDGLLKVLVCTATLAWGVNLPAHT
VVIKGTQLYDAKAGGWKDLGMLDVMQIFGRAGRPQFDKSGEGIIITTHDKLAYYLRLLTS
QLPIESQFLGSLKDNLNAEVALGTVTNVREACAWLGYTYLFIRMKTNPLVYGITWEEVIG
DPSMGAKQRAFIIDAARALDKAKMMRYDEKSGNFYCTELGRIASHFYLQYSSVETYNEML
RRHMSESEVINMVAHSSEFENIVVREEEQDELETLARKACPMEIKGGPTDKHGKISILIQ
VYISRASIDSSSLHSDAQYISQSLARIMRALFEICLRRGWSEMTSLLLEYCKAVDRKIWP
HLHPLRQFERDLSPEIMWKLEERNVDLDRLYEMEDKDIGALIRYSHQGRIVKQYVGYFPY
VNLSASVSPITRTVLKVDLLITPEFEWKDRYHGMSERWLIIVEDSENDTIYHSELFTLTK
RMARGAPTKISFNIPIFEPHPPQYYIRAISDSWLHAESLFTVSFHNLTLPQTQITHTELL
DLKPLPLSALGNKTYEDLYRFTHFNPIQTQAFHVLYHTDTNVLLGAPTGSGKTISAELAM
LHLFNTQPDMKVVYIAPLKAIVRERMNDWRQRLVTQLGKKMVEMTGDFTPDMMALLSADI
IISTPEKWDGISRSWHSRSYVMKVGLMILDEIHLLGADRGPILEVIVSRMRYISSQTERS
IRFVGLSTALANARDLADWLGVRDDGLFNFKPSVRPVPLEVHIQGYPGKFYCPRMNSMNK
PAYAAICTHSPDKPVLIFVSSRRQTRLTALDLIQLAASDEKPRQFLSMADNSLDMILSQV
TDSNLRHTLQFGIGLHHAGLNDRDRSLVEELFSNNKIQVLVCTSTLAWGVNLPAHLVIIK
GTEFYDGKTKRYVDYVITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFYKKFLYEPFPV
ESNLREHLHDHINAEIVSSTIGNKEEAIIYLTWTYLYRRLVVNPSYYGLEDTETYTLNSY
LSRLVETTFEDLEDSGCIKVDDHSVESLILGKIASQYYLSYLTVSMFGSNIGPSTSLEAF
VHILSAAAEFDELPVRHNEDNLNRTLCEKVPFSVDQHRLDDPHVKANLLFQAHFSRAELP
ISDYITDLKSVLDQSIRIIQAMIDVCANSGWLSSALTCMHLLQMIIQGLWFERDSSLRML
PSMSDSLLVHLKGRGVSTVPTLLSCSREELHKLVQPFAASELYQDLQHFPRLDVKVNLQG
EDKEQSKPPMLNIRMQIKNSRRSSRAFSPKFPKAKQEAWWLVLGNVASSELYGLKRISFT
DRVLSTRMKLPQMFDVQETKLIVVSDCYLGFDQEISLGHLAKVV
NT seq
6255 nt
NT seq
+upstream
nt +downstream
nt
atgctcgcgccgctcccgcgcttgacgtgctctctccgcgcccacttcgacgccgaccag
gcctatctcctccgcaaggccgtgctccaagcccgcattcccccaaggccgcatgacgag
tgggagctcgcccggaggatcgtgcccaactgggacgacgctcccagcgatgtgcgtcag
gcgtataagcaatttatcggcgcagtggtggagttgttgaatggggaggtggtgtctgag
gaattccagcaggttgctcagtctgtgtataggttgtttggtggtaatgttgcgcagttt
ggcgctgctgcgaagtcccttgagaaaaggaatgaattggagagccttgtgggctacagt
gtgcaagagtcagttttaaaaaagctagctcagtttgctcagaagctacattcccttcaa
ggggtgagcattcaggaatttgttcaagaagacaaaaaggatgcagctggagatgataca
agtgaattcggggcaagctttgatttcaaagcaccttctcgtttcattattgatgtcact
cttgatgatgacctaccctttggaagtggtgtgttaataccatttgaaaacgagctggat
gatgcctgcagcacatccataaactgtaattcaactgcttctgggggttctgtgaatttg
aggtggctaaaagatcagtgtgatctaattactagaagtggtggctcaatgctctcggga
gatgaacttgcaatggctttgtgcagagtgctccgttcacataaagcgggcgatgagata
gctggtgaactgttggacctggtcggggatgctgcctttgaaatagttcaggatcttctt
tcacataggaaagagctaggggatgctattcagcatggattgacaatattgaaatcggaa
aagctgtcttcgagtaatcaaccaaagatgccatcatatggcacacaggtaacagtacaa
acagagtatgagcgtcagcttgagaagagtaagaggaaagagggaagacgtgctaaacgt
ggtgcagaacatggaacaaatgatattggtgctgatgatttctcatcccttcttctcgca
agtgaaagaaagcagccatttgatgatatgatcggtactggagaaggggaaagtagtttt
acagtaacttctctccctcaaggaaccacaaggaaacatatgaaggggtatgaagaagtg
aaaattccaccaactccaacagcgccattgagacccaatgagaaactgattgaaataaga
gaattggatgatatcgcccaagctgccttccagggatacaagtcactcaaccgtgttcag
agtcgtatttttcaagcgacatacaacaccaacgagaatattctagtttgtgctccgaca
ggtgctggcaaaacgaatattgcaatgatcgcagttcttcatgaggttaaacagcacttc
agggaaggcattttgcataaaaatgagttcaagatagtctatgttgcaccaatgaaggca
ttggctgcagaggtaaccgcaacattcggtcgtcgattatctccattgaacctggttgtt
agagaacttacaggcgacatgcagttgaccaaaaatgagattgaggaaacacagatgata
gtgactactcctgagaagtgggacgtcattacgcgcaaaagcagtgacatgtcactgtca
atgttggtcaagctgataatcattgacgaagtgcacctgctaaatgatgatagagggtca
gtaattgagacactagttgctcgaactcttcgtcaggttgaatccatgcaatcaatgatt
cgcattgttggcctatctgctacactgcctacttacttagaggttgcgcaatttctgagg
gtcaatgcggacactggccttttctactttgactcaagttaccgtccagttcctcttgct
caacagtacattggaatcactgaaagggattacgccaagaaaaatgaacttttcaatagt
ctctgctatgagaaggttgtggaggccattaagcaaggtcatcaagcactggtttttgtt
catacccgcaaggataccgggaaaaccgctagaaccctaattgatctagctgcaaaatca
ggggaattggagttattttcaaatgcagaccatccccaatattcattaatcaagaaagat
gttggtaaagctaaaagtcgtgaagttgtagaatttttcgaatctggatttggcatacat
aatgctggaatgatacgttctgacagaagtttgatggagcgcttgttttccgatggtctc
ttgaaagtccttgtttgtacagcaacattggcttggggagtgaacttaccagctcataca
gttgttataaagggcacacaactttatgatgctaaagctggcggatggaaagatctgggg
atgctcgatgtgatgcagatctttggacgagctgggaggccacagtttgataaaagtggt
gaaggaattattatcacgacacatgacaagttggcttattacttgagattattgactagt
cagcttccgatagaaagccagttccttggatctttgaaagataatttgaatgccgaggtt
gccttgggtactgtaaccaatgtcagggaggcctgtgcctggcttggctatacatacttg
tttataagaatgaagactaatcctcttgtgtatgggataacttgggaagaggtgattgga
gatccttccatgggtgccaagcaacgagcatttattattgatgctgcacgtgcgctagac
aaggctaaaatgatgcgctacgacgaaaagagcggcaacttctactgcacagagctaggt
cgaattgctagccacttttatcttcagtactccagtgttgagacatacaacgagatgctt
cgtcgtcacatgagtgaaagtgaggtgatcaatatggtggcccattcatctgaatttgaa
aatattgtagtcagagaagaagaacaagacgaattagaaacacttgcaaggaaagcatgc
ccaatggaaattaagggtgggccgactgacaagcatggaaaaatttcaattctgattcag
gtttacatctcccgtgcttcaattgatagctcatccttacactcagacgcccaatatatt
agtcaaagcttggctcgcattatgagggcgttatttgagatttgtctgcgtcgagggtgg
tctgagatgacttcattattattggaatattgcaaggctgtggatcgcaaaatatggcca
catctccatccacttaggcagttcgagagggatctttcccctgagataatgtggaaactc
gaggaaagaaatgtggacctggatcgtctttatgagatggaggataaggacattggagct
ctgattcgttattctcatcagggaaggatagttaagcagtatgttggatacttcccatat
gtcaacttatctgcttctgtgagtccaatcaccaggactgttcttaaagtggacctgctt
ataactcctgaattcgagtggaaggatcgttatcatggcatgtcagaacgatggctgatt
atcgtggaggattctgaaaatgatactatatatcattcagagctcttcacactaacaaag
aggatggcaagaggggcacctacaaagatatcttttaatataccgatctttgagcctcat
ccgccgcagtactatatccgagccatatcagactcctggttacatgcagagtcactcttt
actgtctcttttcataatcttacattgccacagacacaaataacacacactgaacttttg
gacttgaagcctcttccactaagcgctcttggcaacaaaacttatgaagatctgtacaga
tttacccatttcaatccgatacaaacacaggctttccatgttctttatcacactgatacc
aatgtactcttgggagctccaacgggaagtggaaagacgatttctgccgaactagcaatg
cttcatcttttcaacacccaaccagatatgaaggtagtttacattgctcctctaaaagct
atagtgcgagaacggatgaatgattggagacaacggcttgtaactcagcttgggaagaag
atggtcgagatgactggtgactttacacctgatatgatggcactattatcagctgatatc
ataatttctacccctgaaaagtgggatgggattagtcgcagttggcacagtagaagttat
gttatgaaggttggactcatgatattagatgagatacatcttcttggagctgaccgtggg
cctattcttgaggtcattgtgtcaagaatgcgatacatatcatcacaaacggaacgttca
attcgatttgttggtttatcaacagcattagccaatgctcgtgacttggctgattggttg
ggtgtcagagatgatggtctatttaatttcaagcccagtgtgcggccggtacctcttgaa
gtgcatattcagggatatcctgggaagttctactgcccgagaatgaatagcatgaataaa
ccagcatatgcagccatatgtactcattcacctgataaaccagttctcatttttgtgtca
tcacgtcgacaaacaagacttacagctcttgatcttattcagcttgcggcatcagatgaa
aaaccaaggcagttccttagcatggcagataactctctagacatgattctttcacaagtc
actgacagcaatttgagacatacgcttcagtttggaataggtctgcatcatgcaggtcta
aatgatagagatagatccttggtcgaggaactcttttcaaacaacaagattcaggtgctg
gtatgcactagcacactggcttggggtgtcaatcttccagctcacctggtcataatcaag
ggtactgaattctatgatgggaaaacaaaaagatatgtcgattatgttatcacagatatt
ctgcaaatgatgggtcgtgcaggccgaccacaatatgaccaacatggcaaggctgttatt
ctcgtacatgaaccaaaaaagagcttttataagaagttcctctatgaaccattcccagtt
gaaagtaatctgagggagcacttgcatgaccacataaatgcagagattgtttctagcaca
atcggtaataaagaggaggcaattatttatcttacttggacttacctatatcgcagactg
gttgttaatccatcttactatggattggaagatactgaaacatataccttgaattcttac
ctctcgaggttagtggaaactacatttgaagatttggaagacagtggatgcataaaagtg
gatgaccattctgtggagtccttgattttggggaaaatagcgtcacaatattaccttagt
taccttaccgtctcaatgtttgggtcaaatattggtcccagtacatcactggaagccttt
gtgcacatactatccgctgcagcggaatttgatgagcttcctgtacgtcataacgaggat
aacttgaatcgaacactctgtgaaaaggtccctttttcagttgatcagcaccgcctcgat
gacccacatgttaaggctaatttactctttcaggcacacttctccagagcagaattacct
attagtgactatatcactgacttgaaatcagttcttgatcagagcatacgtattatacaa
gcaatgattgacgtatgtgccaacagtggatggctttcaagtgcattgacttgtatgcat
ctattacaaatgatcatacagggtctctggtttgagagagattcatcacttcgcatgtta
ccatccatgagtgatagtcttctagttcatcttaaaggtagaggagtttcaacagttccg
accttgctcagttgttctcgtgaagaattacataagttggttcaaccgtttgctgcttca
gagttgtatcaggatctgcaacatttccctcgcctcgatgtaaaagttaatctacagggt
gaagataaggagcagtccaaacctccaatgttgaacatcagaatgcaaataaaaaattca
cggcgctcatcgagagcattttcgcctaaattccccaaggcaaaacaagaagcttggtgg
ctagtcctagggaatgttgcaagctcagagctatatggtctgaaaagaattagttttaca
gatcgtgtccttagcactcgcatgaaattgccacagatgtttgatgtccaggaaacgaag
ctgattgtggtgtcagattgctaccttgggtttgatcaggagatctctcttgggcatcta
gcaaaggttgtctga
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integrated database retrieval system
