Brachypodium distachyon (stiff brome): 100821108
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Entry
100821108 CDS
T01717
Name
(RefSeq) polygalacturonase At1g48100 isoform X1
Organism
bdi
Brachypodium distachyon (stiff brome)
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pectate_lyase_3
End_N_terminal
Motif
Other DBs
NCBI-GeneID:
100821108
NCBI-ProteinID:
XP_003569422
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Position
2:44894233..44898653
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AA seq
544 aa
AA seq
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MKLRVKGFGLLLLLVLLALCSTIDVCDARRGQHWRPRSSPGSSLFKRKGKPKKGSSHRQH
GVNRPSPKQPVTPPAGPGVGKGYQTPYQPTPSPNPSPISPVSPSPKPSPANGNAHSSPKP
PSPSCGKGNQPPAPPPVAASQGAVFNVVDFGAKGDGVSDDTKAFQAAWAAACKQGSSTVL
VPSELEFLVGPISFSGPYCKPNILFQLEGTILAPTNAKAWGSGLLQWLEFTKLNGLSIQG
SGVINGRGQQWWTYSDPNDDEDDDTQYNQELERMPQVKPTALRFYGSFNVVVAGITIVNS
SQCHLKFDNCQGVLVHDLTISSPENSLNTDGIHLQNSKDVSIHHTNLACGDDCISIQTGC
SNIYIHNVNCGPGHGISIGGLGRDNTKACVSNVTVRDVNMFRTMTGVRIKTWQGGIGLVQ
DVRFSNIQVSEVQTPIMIDQFYCDKRTCTNQTSAVAVSGVQYENIRGTFTIKPVHFACSD
SSPCSGITLTGVQLRPVQIPHYHLNNPFCWQAFGELYTPTIPPVACLQIGKPAGNNLQSY
NDIC
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcagagtaaaaggcttcggcctcctgcttctccttgtcctgcttgctctttgc
tccaccattgatgtctgtgatgcaaggagaggccagcattggaggccaaggagctcacca
ggctcctctcttttcaagagaaaaggcaaaccaaagaagggtagctcacaccggcagcac
ggagtcaaccggccgagcccgaagcagcctgtcaccccgccagcaggccctggtgttggc
aaaggataccagacgccatatcagccaactccaagtccaaatccaagccccatttcacct
gtcagtccaagcccgaagccgagccctgccaatggcaatgcgcattcgagccccaaacct
ccatctccaagctgtggaaagggtaatcagccaccggcaccgccaccagtagcagcctca
cagggcgcggtcttcaacgtggttgacttcggagctaagggtgacggagtttcagatgat
acaaaggctttccaagcagcatgggctgctgcgtgcaagcaggggtcatctacagtcctc
gtaccatcagaactagagtttcttgttgggccaatatcgttttctggtccttactgcaaa
ccaaacattctgttccagctggaaggaacgatcttagccccaacaaatgctaaagcctgg
ggttctggtttgcttcaatggctcgaattcaccaaactaaatgggctatcaattcaagga
agtggcgtcataaatggtagagggcaacagtggtggacctactcggacccaaatgacgac
gaggatgatgacacgcagtacaatcaggagcttgagaggatgccgcaggttaaacctaca
gcattgaggttctatggtagtttcaacgttgtagtggctggtatcactattgtcaacagc
tcacagtgccatctcaagtttgacaattgtcagggtgtgctggttcacgacttgacaata
tcctcccctgagaacagtctcaacactgatggaatacacctgcagaactccaaagatgtc
agcattcatcataccaacttggcttgtggtgacgattgtatctccatccagacaggatgt
agcaacatatatatacacaatgtgaattgtggaccagggcatggaatcagcattggtgga
ctaggccgggacaacaccaaagcatgtgtttctaatgttacagtaagagatgtcaatatg
ttcagaacaatgactggtgtcagaatcaagacctggcagggtggtatagggctagttcaa
gacgtaagattctcaaacatacaagtctccgaagttcaaacacctattatgatagaccag
ttttattgtgacaaaagaacctgcacaaatcaaacatcagcagtggcagtatcaggcgtt
cagtatgagaacatcagagggacatttacaatcaagcctgtccattttgcatgcagtgac
agctcaccttgttcagggatcacacttactggagtacaacttagacctgtgcaaataccc
cactaccacctaaacaacccattctgctggcaagcttttggggaactctacacaccaacc
atccctcccgtagcttgtttgcagattggaaaacctgctgggaacaacttgcagtcatac
aatgacatatgctga
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