Brachypodium distachyon (stiff brome): 100821161
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Entry
100821161 CDS
T01717
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase MINDY-3
KO
K22647
ubiquitin carboxyl-terminal hydrolase MINDY-3/4 [EC:
3.4.19.12
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bdi04121
]
100821161
Enzymes [BR:
bdi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
100821161
Ubiquitin system [BR:
bdi04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
MINDY
100821161
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MINDY-3_4_CD
UIM
UIM_2
Motif
Other DBs
NCBI-GeneID:
100821161
NCBI-ProteinID:
XP_010239899
UniProt:
I1IXP0
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Position
5:complement(13331775..13339322)
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AA seq
627 aa
AA seq
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MGDRDEDEELQMALRMSLHGSPPAQPEPKRSKPPSTAGESPEAEARRKQRELMAAAAEKR
RRSFASPATVVVAPPPPPAVVAEQTPSPQEDVKVESELTVVPMEEPKEAEVEVEEEEKGE
ELPPNIAEKLWTMVFGSRVSKAVLAQWSNQGIRFSSDPETTMGLVQHEGGPCGVLATVQA
YVLKYILFFSDNLDNPEVSDPSYALGQRRFYQSSFAARDDFSSLTEDGKKRALVHAMVEI
LFLCGAGKKAVVAIVGGVNRGVSGSDSKQKIDPTLEGLSVESAMDFQKVLRVCTFTSRKD
AFNMLLANIPLFESRLGAILFLISSLLSRGLELIQTDRDDPSQPLVTAPFGHASQEIVNL
LLCGEAVPNVFDGKMDLGGGMSLKGIPNDVEVGFLTLLESLNLCKVGQYLKCPKWPIWVV
GSESHYTVLFALNPNVQEENELEERESKIRRAFDAQDQSGGGGFISVEGFQQVLRDTDIN
FPPDKLEDLCNAGIIVWSEFWQALLQLDKRAGGMKDPTGLMGKKQFTMYHFNGIAKSVLN
GNSSTGGSSPIQRPRICRLNVSVPPRWSQDEYLADVVSSSTSGSKDDSVLSLAPPVQTSQ
HAPLVDCIRTRWPRAVCNWAGDVPSIV
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgggggatcgggatgaggatgaggagctccagatggcgctccgcatgagcctgcacggt
tcgccgccggcgcagccggagcccaagcgcagcaaacccccgtcgaccgccggggagtcg
ccggaggcagaggcgcgccgcaagcagcgagagctcatggccgccgccgccgagaagcgc
cgtcgttccttcgcctcgcccgccaccgtcgtggtagcgccgccaccgccacccgccgtg
gtggcggagcaaacgccctccccgcaggaggacgtaaaggtggagtcggaactaaccgtg
gtacctatggaggaacccaaggaggcggaagtggaggtggaagaggaggagaaaggggag
gagttacctccgaacattgctgagaagctttggaccatggtgtttgggagcagggtttca
aaggcagtgctggcgcagtggagcaatcagggtatcagatttagctcggacccagaaaca
actatggggctagtacagcatgaaggtggtccttgtggtgtcttagctacagtacaggca
tatgtcctcaaatatattttgtttttctctgataacttggataatccagaggtcagtgat
ccatcatatgctttgggacaaagacgcttttatcagagttcttttgctgccagggatgat
ttttcttccctaactgaggatggaaagaagagagcattggttcatgctatggtggaaatt
ctttttttatgtggagctgggaaaaaggctgttgtggctatcgttggaggtgtcaatcgt
ggagtaagtggatctgatagcaagcagaaaattgatcccactttggaaggcctttctgtt
gaatcagcaatggatttccagaaagttcttagagtatgtacatttacctcgaggaaggat
gcattcaacatgcttctggcaaacattcctctattcgaaagtcgactgggagccatttta
tttctcatctcttctctactctcacggggattggaacttatccaaacagacagggatgat
ccaagccaaccattggtcacagctccatttgggcatgcttcacaggaaattgtgaattta
ttgctttgcggagaggctgttccaaatgtatttgatggtaagatggaccttggtggtggc
atgtctctgaaaggcattccaaatgatgtggaagttggtttccttacccttctggaatca
ctaaatttgtgcaaggttggtcagtacctgaaatgcccaaaatggcctatatgggtggtg
ggaagtgaaagtcactacactgtcctttttgctctaaatcccaacgtccaagaggagaat
gagctggaagagcgggaatccaaaattaggagggcatttgatgctcaagatcaaagtgga
ggtggaggctttattagcgttgagggattccaacaagttctcagggatactgacataaat
tttcctcctgataagcttgaggatctctgtaatgcgggtattatagtatggagtgaattc
tggcaggcactactacagttggataaacgggctggaggcatgaaggatccaactggcctt
atgggtaagaagcaattcactatgtaccactttaatggaatcgccaagtctgtgctgaat
gggaattcaagcacaggaggctcaagtccaatacaaagacccaggatatgcaggttaaat
gtcagtgtcccacctaggtggagtcaggatgaatatctagctgatgtagtaagctcatcg
accagcggcagcaaggatgacagtgttctttctcttgctccacctgttcagacttctcag
catgcgccgctagtggactgtattagaactcgatggccccgagcagtttgcaactgggct
ggagatgttccgagtattgtctga
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