Brachypodium distachyon (stiff brome): 100821190
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Entry
100821190 CDS
T01717
Name
(RefSeq) KH domain-containing protein At4g18375 isoform X1
KO
K21444
poly(rC)-binding protein 3/4
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bdi03019
]
100821190
Messenger RNA biogenesis [BR:
bdi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
100821190
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
KH_Vigilin
Raftlin
Motif
Other DBs
NCBI-GeneID:
100821190
NCBI-ProteinID:
XP_003566150
UniProt:
I1HDN9
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All DBs
Position
2:6481172..6488505
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AA seq
729 aa
AA seq
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MASNVNPSKRPFQKNSSEHNGRGKWQKTKHTSSQQPPLVIQPGVPLIRILCPTEKCGNVI
GKGGVIIAKIRQENGVKIRVDEAVPGCDERVIVITITEKDKEASREQGKQNVGGAAVSAD
AEHEKEKDHIKEENVDSENNHGKEEKVDSENNHGKEEKVDSENNHGKEEKVDSERDASKE
EKDDPSVAKDTKAEPERVLLSPMNAILHVFDRIFITEIGNESGDPSGERTPVSFRLLVLD
SQVGWLLGNRGSVIKQMSADSGCEIRVSKEKLPLCALLKDELCQITGELDSVRKGLNAVA
QVLLTHPPRESDVLPSGLSSHAFNRSDALPPGMQPNFSLPFQGPSHARGPFDSIDPRPNI
PPFPTFPDQRSNIPPFPAFPDALMHSHASVPPEPLTFRLLCSSDKVGSIIGKGGNNIKTI
QKDTGCEIKILETVPKSEDRVIVISGPAHPGDGISPAQNAILHVQRRITPPTANNKEGAA
ISRLIVSPNQVGCLLGKGGSIIAEMRKLSKAHIVVLSKDKIPKGVQESDEVVQITGDSEA
IQEALMQITARLRNHLFRDRMAAMGPNMQPPFGSLDPQFGAFAGSHESTSPRIYPNASQF
HKDFMGRPLDEMPAPWNAKGMRDVGDPMSISGMPGMPHRGIGGFSGAGHSSMPNITRDIM
VPRFVIPALCGHDGGCLNMIREFSGAMITFTEPIADAADTPFMISGTLDQMHAARSLIQA
FVLSEPPAP
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaaatgtgaacccttccaagagaccgtttcagaagaattcttcagaacacaat
ggccggggcaagtggcaaaagacaaagcatacttcttcacagcagcctccactggtgata
cagcctggtgttcctcttatccgcattctctgccccactgaaaaatgtgggaatgtcatt
ggtaaaggtggcgtcatcatcgcaaagataaggcaagagaacggagtaaaaatccgggtt
gatgaagcagtccctggttgtgatgagagagttatcgtcataactatcactgagaaggac
aaagaagctagccgtgagcaaggtaaacagaatgttggaggtgctgctgtttctgctgat
gccgagcatgagaaggagaaagaccacatcaaggaagaaaatgttgattcagagaacaac
catggcaaggaagaaaaggttgattcagagaacaaccatggcaaggaagaaaaggttgat
tcagagaacaaccatggcaaggaagaaaaggttgattcagaaagagatgccagtaaggaa
gaaaaggatgatccctctgttgctaaagatacaaaggcagagccagagagggtactactg
tcgccaatgaacgccattttgcatgtttttgataggatttttataactgaaatcggaaat
gaatctggggatccatcaggtgaaagaactcctgtttctttcagattgttagtgctagat
agccaagtaggatggcttttggggaaccgtggtagtgtgattaagcaaatgtcagctgat
agtggctgtgaaatcagagtttcaaaggagaagcttccgttatgtgctttacttaaagat
gaactttgccagatcactggagagcttgactcagtcaggaaaggtctgaatgccgtggct
caagtgcttcttactcacccccctagggaaagtgatgtacttccttctggtttatcatcg
cacgccttcaatcggtcggatgctcttcctccagggatgcaacctaactttagtctccct
tttcaagggccatcccatgccagaggaccttttgatagcattgacccaaggccaaacatt
cctccttttcccacttttcctgaccaacgctcaaacattcctccttttcctgcatttcct
gatgctctaatgcatagccatgcttcagttcctccagaaccactcacctttaggttatta
tgttcaagtgacaaggttggaagtataatagggaagggtggaaacaatatcaagactatt
cagaaagatacaggttgtgaaataaaaatccttgagactgttccaaaatcagaagatcgt
gtcatagttatttctggacctgcgcatcctggtgatggaatttcccctgcgcagaatgca
attctgcatgtacaacgtagaattacgccacctaccgctaacaacaaggagggcgctgcc
atatctaggctgattgtttcacctaatcaagttggctgcctccttggcaaaggtggtagt
atcatagctgaaatgaggaagctatcgaaagctcatatagtagtgttgagcaaagacaag
atcccaaagggcgtccaagaaagtgatgaagttgttcagataactggggattccgaagct
attcaggaagctctgatgcagataactgctaggttacgtaaccatcttttccgggacaga
atggctgcaatgggtcctaacatgcagccaccttttgggtcgctagatcctcagtttggt
gcatttgcgggaagccatgaatctacgtctccaaggatatatcctaatgcatctcagttt
cacaaagatttcatgggacggccattggatgagatgcctgctccttggaacgcaaagggc
atgcgggatgttggtgatccgatgtcaatatctggcatgccaggaatgcctcatagagga
attggtggattttctggcgctggccattcatctatgccaaacataactagagatatcatg
gttccaagatttgttatacctgcgctttgtgggcacgatggaggttgtttgaatatgatt
cgtgagttttcaggagctatgataacattcactgaaccaatagctgatgccgcagacaca
ccttttatgatatctggcacactggaccagatgcatgcagcccgaagtcttattcaagca
tttgttctaagcgaaccacctgccccatga
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