KEGG   Brachypodium distachyon (stiff brome): 100821196
Entry
100821196         CDS       T01717                                 
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
  KO
K03093  RNA polymerase sigma-I factor
Organism
bdi  Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:bdi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bdi03021]
    100821196
Transcription machinery [BR:bdi03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     100821196
SSDB
Motif
Pfam: Sigma70_r3 Sigma70_r2 Sigma70_r4
Other DBs
NCBI-GeneID: 100821196
NCBI-ProteinID: XP_003567807
UniProt: I1HFX3
LinkDB
Position
2:complement(13274724..13277258)
AA seq 524 aa
MASTVTTPSRPLPSSAGIISQHRRRCYCCCSCRPAAVLALAGGGAAAKPRRRRSSPAAST
SCAALKSPEKQSTAAAAAKVPPRRPARRSATPAPEEAAAAGASTDYGEVAAVLETLYQLS
PTVVEEDEEESSIKEAEKKKQKQRRKTKTLPAMKTTVVVRSRRRGRRMDLGKRVEMREAA
AGGKLGGDDEAAEFEEALLREHGVSTDMGGLDWRRTKIPPVLSAAHSSRLFKLMQPMKAI
FQVKENLESELGREPTDAELGAAMNMAVPRLRRHRDVGRAARNKLIKHNLRLVLYAINRY
YPDMAGGGDGGKFEEVCQAGANGLITAIDRFEPRRGFRLSTYALFWVRHSISRAMAALSS
FTHFPFAMESERREIGKAREELAWELGRAPTDEETMRKAGVSPARYRDVARMSRPAGSLH
ARNRVTQEELINEVTDADAVGAADTHRHSNRLLRLAIDDLLDSLKPKESVVMRQRFGLDG
RGRRTLSEIAGNLRISREMVRKYELKALMKLKHPTRVEYLRRYM
NT seq 1575 nt   +upstreamnt  +downstreamnt
atggcgtccaccgtgacgacgcccagcaggccgctcccgtcctccgctgggatcatcagc
caacaccgccgccggtgctactgctgctgctcctgcaggcccgcggcggtgctcgcgctc
gccggtggcggagctgctgcaaaaccgcggcggcgaagatctagtccggcggccagcacc
agctgcgctgctctcaaatcgcccgagaagcagagcacggcggcggcggcggccaaggtc
cctccgcgccggcccgcgagaagaagcgccaccccggcgcccgaggaggccgcggcagct
ggcgccagcacggactacggcgaggtggccgccgtactcgagacgctgtaccagctgagc
cccaccgtcgttgaggaagacgaagaagagagttcgataaaggaggcggagaagaagaag
cagaagcagaggaggaagacgaagacgctgccggcgatgaagacgacggtggtggtgagg
agccggcggcgggggcggaggatggatctggggaagagggtggagatgcgggaggcggcg
gcgggtgggaagctgggcggcgacgacgaggcggcggaattcgaggaagctctgctaagg
gagcatggcgtgtcgacggacatgggcgggctcgactggcggcggaccaagatcccgccc
gtgctctccgccgcgcacagcagccgcctcttcaagctcatgcagcccatgaaggcgatc
tttcaggtgaaggagaacctggagagcgagctggggagagagccgacggacgcagagctc
ggggcggccatgaacatggcggtgccccgcctgcgccgccaccgcgacgtcggccgggcc
gcccggaacaagctcatcaagcacaatctccggctcgtgctctacgcaataaacaggtac
tacccagacatggccggcggcggcgacggcgggaagttcgaggaggtgtgccaggcgggc
gccaacgggctcatcacggccatcgaccgcttcgagccccggcgcggcttccggctctcc
acctacgcgctcttctgggtccgccactccatctcccgcgccatggcggcactctcctcc
ttcacccacttccccttcgccatggaatccgagaggcgggagatcgggaaggcgagggag
gagctggcgtgggagctggggcgggcgccgacggacgaggagacgatgaggaaagccggc
gtgtcgccggcgaggtaccgcgacgtggcacggatgtcaaggccggcggggtcgctccac
gcccggaaccgcgtgacgcaggaggagctcatcaacgaggtcaccgacgccgacgccgtc
ggggccgccgacacccaccggcacagcaaccggctcctccgcctcgccattgacgacctc
cttgattcgctgaagcccaaggagagcgtggtgatgaggcagaggttcggattggacggg
agggggcggcggacgctgagcgagatcgcggggaacctgaggatctcgagggagatggtg
cgcaagtacgagctcaaggcgctcatgaagctcaagcaccccacaagggtcgaatacctc
cgcagatacatgtag

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