Brachypodium distachyon (stiff brome): 100821196
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Entry
100821196 CDS
T01717
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
KO
K03093
RNA polymerase sigma-I factor
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bdi03021
]
100821196
Transcription machinery [BR:
bdi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
100821196
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Motif
Other DBs
NCBI-GeneID:
100821196
NCBI-ProteinID:
XP_003567807
UniProt:
I1HFX3
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Position
2:complement(13274724..13277258)
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AA seq
524 aa
AA seq
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MASTVTTPSRPLPSSAGIISQHRRRCYCCCSCRPAAVLALAGGGAAAKPRRRRSSPAAST
SCAALKSPEKQSTAAAAAKVPPRRPARRSATPAPEEAAAAGASTDYGEVAAVLETLYQLS
PTVVEEDEEESSIKEAEKKKQKQRRKTKTLPAMKTTVVVRSRRRGRRMDLGKRVEMREAA
AGGKLGGDDEAAEFEEALLREHGVSTDMGGLDWRRTKIPPVLSAAHSSRLFKLMQPMKAI
FQVKENLESELGREPTDAELGAAMNMAVPRLRRHRDVGRAARNKLIKHNLRLVLYAINRY
YPDMAGGGDGGKFEEVCQAGANGLITAIDRFEPRRGFRLSTYALFWVRHSISRAMAALSS
FTHFPFAMESERREIGKAREELAWELGRAPTDEETMRKAGVSPARYRDVARMSRPAGSLH
ARNRVTQEELINEVTDADAVGAADTHRHSNRLLRLAIDDLLDSLKPKESVVMRQRFGLDG
RGRRTLSEIAGNLRISREMVRKYELKALMKLKHPTRVEYLRRYM
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccaccgtgacgacgcccagcaggccgctcccgtcctccgctgggatcatcagc
caacaccgccgccggtgctactgctgctgctcctgcaggcccgcggcggtgctcgcgctc
gccggtggcggagctgctgcaaaaccgcggcggcgaagatctagtccggcggccagcacc
agctgcgctgctctcaaatcgcccgagaagcagagcacggcggcggcggcggccaaggtc
cctccgcgccggcccgcgagaagaagcgccaccccggcgcccgaggaggccgcggcagct
ggcgccagcacggactacggcgaggtggccgccgtactcgagacgctgtaccagctgagc
cccaccgtcgttgaggaagacgaagaagagagttcgataaaggaggcggagaagaagaag
cagaagcagaggaggaagacgaagacgctgccggcgatgaagacgacggtggtggtgagg
agccggcggcgggggcggaggatggatctggggaagagggtggagatgcgggaggcggcg
gcgggtgggaagctgggcggcgacgacgaggcggcggaattcgaggaagctctgctaagg
gagcatggcgtgtcgacggacatgggcgggctcgactggcggcggaccaagatcccgccc
gtgctctccgccgcgcacagcagccgcctcttcaagctcatgcagcccatgaaggcgatc
tttcaggtgaaggagaacctggagagcgagctggggagagagccgacggacgcagagctc
ggggcggccatgaacatggcggtgccccgcctgcgccgccaccgcgacgtcggccgggcc
gcccggaacaagctcatcaagcacaatctccggctcgtgctctacgcaataaacaggtac
tacccagacatggccggcggcggcgacggcgggaagttcgaggaggtgtgccaggcgggc
gccaacgggctcatcacggccatcgaccgcttcgagccccggcgcggcttccggctctcc
acctacgcgctcttctgggtccgccactccatctcccgcgccatggcggcactctcctcc
ttcacccacttccccttcgccatggaatccgagaggcgggagatcgggaaggcgagggag
gagctggcgtgggagctggggcgggcgccgacggacgaggagacgatgaggaaagccggc
gtgtcgccggcgaggtaccgcgacgtggcacggatgtcaaggccggcggggtcgctccac
gcccggaaccgcgtgacgcaggaggagctcatcaacgaggtcaccgacgccgacgccgtc
ggggccgccgacacccaccggcacagcaaccggctcctccgcctcgccattgacgacctc
cttgattcgctgaagcccaaggagagcgtggtgatgaggcagaggttcggattggacggg
agggggcggcggacgctgagcgagatcgcggggaacctgaggatctcgagggagatggtg
cgcaagtacgagctcaaggcgctcatgaagctcaagcaccccacaagggtcgaatacctc
cgcagatacatgtag
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