Brachypodium distachyon (stiff brome): 100821236 Help Entry 100821236         CDS       T01717                                  Name (RefSeq) DNA mismatch repair protein MSH6   KO K08737   DNA mismatch repair protein MSH6 Organism bdi  Brachypodium distachyon (stiff brome) Pathway bdi03430   Mismatch repair Brite KEGG Orthology (KO) [BR:bdi00001]  09120 Genetic Information Processing   09124 Replication and repair    03430 Mismatch repair     100821236  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:bdi03400]     100821236 DNA repair and recombination proteins [BR:bdi03400]  Eukaryotic type   SSBR (single strand breaks repair)    MMR (mismatch excision repair)     Mismatch and loop recognition factors      100821236 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  MutS_V MutS_III MutS_I MutS_IV MutS_II PTM_DIR17_Tudor LBR_tudor Tudor_KDM3B Motif Other DBs NCBI-GeneID:  100821236 NCBI-ProteinID:  XP_003576514 UniProt:  I1IQ01 LinkDB All DBs Position 4:35454597..35466592 Genome browser AA seq 1318 aa AA seqDB search MASRRLSNGRSPLVRKQSQITSFFSTPSPSSSASKSAAKPTPSPSSTPKSDAKPSPSPSS SAPKPAAKPSPSPLNPKARKPPLVVPSPSPPKSAPPAPQQQGQDEEKKEQNASAAPAGEA VGRRLRVYWPLDDAWYEGRVDDYDEGSRRHRVKYDDGEDEEVDLRKEKFEWAAEEATPPP ARKLRRLRRMSDTANAKSLAGLEDEEIGDSPEDGDWKKDAEEVELDDEEDEAVSSRKGKS RNSLSMSASTPRSTSGLASTSSGSTVLKKRKKVDVGTLDCAKKFSFQLASTPEKVELKVP MSCDGREKILENAHTVLTGELAERFGQRQAEKFKFLGDGRKDAKGRRPGHPAYDPRTLSL PPQFLANLTGGQRQWWEFKSQHMDKVLFFKMGKFYELYEMDAHVGARELDLQYMKGDQPH CGFPEKNLSVNLEKLAQKGYRVLVVEQTETPNQLELRRKETGTKDKVVRREICAMVTKGT LTEGEFLLANPDPSYILSVAESYQHSSKKSQDGHTIGVCIVDVSTSKFVVGQFQDDAERH VLCSILSEIRPVEIIKPAKMLSPETERALKNNTRDPLINDLLPSTEFWDAEKTIHEIEQY YSSSDKLTTSQNTPGVQNNVGCLPALLSELIGAGDRAYALSALGGSLFYLRQVLLDKKLI PCAEFEPLTCSGLLNNTRKHMIFDAAALENLEILENATGGLSGTLYAQLNHCVTGFGKRL LKRWIVRPLYDSKAILQRQGAIAIFKGVGHECAIQFRKDLSRLPDMERLLARLFSSCDEN GRSSKSVVLYEDVSKRLLQQFTSALRGCQQMFQACSSVRMLTGTEGSCLLNDLLSPGKGL PDVSSILDHFRDAFDWSEADHNGRIIPHEGCDPEYDATCSAIEEIESSLKEYLKEQRELL ADSSVKYVDVGKDTYLIEVSESLGGSVPRNYELQSTKKGFYRYWTPEVKELISELSKAAA GKESILKGILQKLIHLFVEHHSKWRQLVSVVAEIDVLISLAIASDYFEGPTCRPTIRESY GSDDTPTFYARNLGHPIIRSDSLGKGSFVPNDIKMGGPGNASFIVLTGPNMGGKSTLLRQ VCLTIILAQIGANVPAENFEFSLVDRIFVRMGARDHIMAGQSTFLVELMETASVLSSATK NSLVALDELGRGTSTSDGQAIAASVLEYLVHHVQCLGLFSTHYHRLAVEQQDIKVSLCHM ACEVGMGEGGLEEVTFLYRLTAGSCPKSYGVNVARLAGIPASVLQRANQKSNEFEANYGK QHFATKDKFVCALREDNFATIKDLFRVVKAGNHQEGQVASLSMLREIQKLARVQAIKG NT seq 3957 nt NT seq  +upstreamnt  +downstreamnt atggcgtcgcgccgcctgagcaacggccgctcccctctcgtgcggaagcagagccagatc acctccttcttctccaccccctcgccctcctcctccgcctcgaagtccgccgcaaaacct acgccgtcgccctcctccaccccgaagtccgatgcaaagccctcgccgtcgccctcctcc tccgccccgaagcccgctgcaaaaccatcgccgtcgcccctgaaccctaaggcgaggaag ccccctctcgtggtgccttccccttcccctcccaagtcggcgccgccagcaccgcagcag caggggcaggatgaggagaagaaggagcagaatgcttcggcggcgcctgcgggagaggcc gtggggaggcggctgagggtgtactggccgctggacgacgcctggtatgagggcagagtg gatgattacgacgaaggctcgcggcggcaccgcgtgaagtacgacgatggggaggacgag gaggtcgacctcaggaaggaaaaattcgagtgggccgcggaggaggcaacaccaccgcca gcgaggaagctgcgacgtctcaggcggatgtctgataccgcaaacgcgaagtcgctggct gggctggaagacgaggagattggggattcccctgaggacggggactggaagaaggacgcc gaggaagtggagttggatgatgaagaggacgaggcggtcagttcgcgaaaggggaagtca aggaactccttgtctatgtcagcgtcaacaccacggtcaacgtctggcctggcctccaca tcatcagggtcaacggtgttaaagaagaggaaaaaagtggatgtgggtacattggattgc gctaaaaagttcagctttcaactagctagcacccctgaaaaagttgaattaaaagtgcca atgagctgtgacgggagggagaaaattttagagaatgctcacactgttcttactggagag ctggctgagcgctttggtcagcgccaggcggaaaagttcaaattccttggggatgggcgc aaagatgcaaaagggagacggcctggacacccagcctatgatccaagaactctctccttg cctccccagttcttggcgaacttgacaggcggacagagacaatggtgggaatttaaatca cagcatatggataaggttctgttcttcaagatgggcaaattctatgaactgtatgagatg gatgcccatgttggggcaagggagcttgatcttcagtacatgaagggtgaccaacctcat tgtggcttcccagagaagaacttatcagtgaatttggagaaactagctcagaagggttac cgcgttctagttgtagagcagaccgaaacaccgaaccagcttgaactccgccgtaaagag acgggcacaaaagacaaggttgtgaggcgtgaaatatgtgcaatggtcacaaagggaaca ctaacagaaggagaattccttctggcaaacccagatccgtcatatatattatctgtggct gaaagttatcaacatagttcaaagaagagtcaagatggtcatacaatcggtgtttgcata gttgatgtttctacaagcaaatttgttgttggacagttccaagatgacgctgaacgccat gtgttgtgttctattttgtctgaaataagacccgtggaaatcataaagccagctaagatg ttgagtccagaaactgagagggcactgaaaaacaatactagagatcctttgataaatgat ttgcttccatctacggaattttgggatgcagagaagactattcatgagatagagcagtac tacagctcatcggataagcttactacatcacaaaacactcctggtgtacaaaacaatgtg ggctgtctgcctgccctgttaagtgagctaattggagctggtgacagagcatatgcactt tctgctctgggaggttccttattttatttaaggcaagtccttctggataagaaattgatt ccatgtgctgagtttgagccccttacatgctcggggctcctcaacaatacgcggaagcat atgatattcgatgcagcagcacttgaaaatttggagattttagagaatgcaactggtggc ctctcagggactttgtatgcacaattgaatcattgtgttacgggatttgggaaaaggttg ctcaaacggtggattgtaaggcctttgtatgacagcaaagcaatactacagcgtcaaggt gctatcgctattttcaagggtgttgggcatgaatgcgctatccagttccgtaaggattta tctaggctcccagacatggagcgtctgcttgcacgccttttctctagctgtgatgaaaat gggagaagttcaaagtcagttgttctttatgaagatgtatcaaaaagactgcttcagcag ttcacttctgctcttcgtggttgccagcaaatgttccaagcatgttcttctgtcaggatg ttgacaggcacagaggggtcatgtctactaaatgatttgctttcaccaggcaaaggatta ccagatgtatcgtctattttagatcacttcagggatgcatttgattggtcagaagctgat cataatggtcggatcataccccatgaaggttgtgatcctgaatatgacgccacttgctct gccatagaggagattgaatccagtctaaaagaatacctgaaagagcaaagggagctactg gcagactcatcggtgaagtatgtggatgttggaaaagatacataccttattgaagtgtct gagagcctgggaggttctgttcctaggaactatgagttgcagtctacaaaaaagggcttc taccggtactggacaccagaagtaaaagagctaatatcagaactttctaaggctgcagca ggcaaagaatcaatattgaaaggcattcttcagaagctaattcatctctttgttgagcat cacagcaagtggagacagttagtttctgtagttgctgagattgatgttttgattagtctt gctatcgcgagtgattattttgaggggccaacttgccgtccaactatcagagaatcatat ggttcagatgatactcctactttctatgcaagaaatcttggacacccaattattcgaagt gattcattaggcaagggttcttttgtgcccaatgacatcaagatgggtgggcctggcaat gccagctttattgttcttacaggtccaaatatgggtggtaaatcaactcttctgcgtcaa gtttgtcttaccataatattggcacagattggagcaaatgttccggcagaaaactttgag ttttctcttgttgaccgcatctttgttcgcatgggagcaagggaccatattatggctggc caaagtacattcttggtggagctcatggagactgcttctgtgctttcgtcagctaccaag aattctcttgtggctttagatgagcttgggcggggcacatcaacttctgatggacaagct attgcggcatctgttctagaatatctagttcatcatgtgcaatgtctaggcttgttttct acgcactaccatagattagcagtggaacaacaggatatcaaggtatcactttgtcatatg gcatgcgaagtaggtatgggagaaggaggtttggaagaagtgactttcctttataggtta acagctggttcatgtcctaaaagctacggcgtaaatgttgctcgattagcaggaatacct gcatcagtgcttcaaagggcaaatcagaaatcaaatgaatttgaggccaattatgggaag caacacttcgcgactaaagataagtttgtatgtgcactgagggaggacaatttcgctacc attaaggatttgttccgtgttgtgaaggcagggaatcatcaagaaggtcaggtggcaagc ttaagtatgcttcgtgaaatacagaagcttgccagggtgcaggctataaaaggataa

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