KEGG   Brachypodium distachyon (stiff brome): 100821384
Entry
100821384         CDS       T01717                                 
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog isoform X1
  KO
K18643  katanin p80 WD40 repeat-containing subunit B1
Organism
bdi  Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:bdi00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:bdi04812]
    100821384
Cytoskeleton proteins [BR:bdi04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     100821384
SSDB
Motif
Pfam: WD40 WD40_Prp19 Katanin_con80 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 EIF3I Beta-prop_WDR90_POC16_2nd WDR55 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_EML Beta-prop_SCAP Beta-prop_TEP1_C WD40_MABP1-WDR62_1st NBCH_WD40 WDR90_beta-prop_4th Beta-prop_WDR75_1st Beta-prop_DCAF4 Beta-prop_IFT122_1st Beta-prop_EIPR1 eIF2A Beta-prop_SPT8 Beta-prop_IFT140_1st Beta-prop_HPS5 WD40_RFWD3 Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_VPS8 Beta-prop_IP5PC_F Beta-prop_Vps41 Beta-prop_DCAF12 Myf5
Other DBs
NCBI-GeneID: 100821384
NCBI-ProteinID: XP_010232433
LinkDB
Position
2:51138854..51148109
AA seq 830 aa
MDPEKRGYKFQEFVAHDADVRSLAIGKKTSRVFITGGNDRKVNLWAIGKQTPLLSLSGHT
SSVEAVEFDTAEVLVLAGSSNGSIKLWDLEEAKVVRSLTGHRSSCTAVEFHPFGEFFASG
SSDTDLKIWDIKKKGCLHTYKGHSGAIKTIRFTPDGRWIVTGGEDNIVKVWDLTAGKLLH
DFKFHSGEIRCIDFHPQEFLLATGSADRTVKFWDLETFELIGSAGPESTGVRSTVFHPDG
KTLFCGLDESLKVFSWEPIRCHDAVDMGWSNLADLSIYEGKLLGCSYHEHRVGVWVADIS
LIGPYALGVLPKANFFAELVSMDDNPVKSNDTTVKSIRTVATPHPKNSYKVQESGIAAES
GVRGSHLIPASTEKIKKDKSSTIPRRPDSFVKPSTPLRHVKLDSPSTNKKSAERNFRQRD
MPLLSRTGISNTSSTTKRFHPTESVTVKDIYTTPQAVSVPVVVSRDILEDKTAGNVNRGI
AGRATVIDDFHTPVHLRKPFPSGGAGDSVSSVRSVLTEPDVCSEGFSGLKFSFGLSQYGK
KEGSDGTDKGDITQIAENMDRVVSLEHPVQSNDDKSAFEPPCSTTEPSRVKYVRGVAVPL
GKTKSLVERFEKRESSSIDCSSPTGSCSDHIARADSPPTSLAGPIQGYEKDLSTVEEVMT
PIDLVRNHEEFINVVKSRLTKLEMMRHVFNQNGIKGAITAVAKLPDIAVQADVVSTLKGK
LGLFNLDIFSGFLPVLAGLLNSRTERHAIVSLELLLDLIKVFGPVIRSTLSASSTVRVDI
QAEQRLQRCTRCFNHLQKILQALHPLIMRGGQSAQLAEELNMSLQDLVVF
NT seq 2493 nt   +upstreamnt  +downstreamnt
atggaccctgagaagcgcggctacaagttccaggagtttgtggcgcacgatgctgatgtg
aggtccttggccatcggtaagaagacgagccgtgtgttcatcactggtggcaatgatcgc
aaggtcaacctgtgggccatcggcaagcagacacccctcctgagcttgtcgggccacaca
agctcggtcgaggctgtggagtttgatacagcagaggtgcttgtgcttgctggctcatca
aacggctccatcaagctctgggacttggaagaagctaaagttgtgcgctctctcactggg
catagatcaagttgcactgctgttgaattccatccatttggcgaattttttgcatctggt
tcatcagatacagatctcaagatctgggatataaagaagaaaggatgccttcatacatat
aagggccacagcggagcaattaaaacgatcagatttacacctgatgggcgatggattgtc
accggtggagaagataacattgtgaaggtgtgggatctgacagctggaaagcttctgcat
gatttcaagttccacagtggagaaatccggtgcattgatttccatcctcaagaatttttg
cttgcaacaggctcggcagatcgaactgtgaagttctgggatcttgaaacctttgaattg
ataggttccgctggacccgagagtactggtgtacgttctacagtttttcacccagatgga
aagacccttttctgcgggctagatgaaagcttaaaggtattctcttgggaaccgataaga
tgccatgatgctgttgacatggggtggagcaatttagcggaccttagtatttatgaagga
aaactcttgggatgctcataccatgaacaccgtgttggtgtttgggttgctgatatatca
ctcattggaccctatgctcttggtgttttgccgaaagcaaatttttttgctgagcttgtc
tcaatggatgataatcctgtgaaatcgaatgataccactgtgaagtccattcgaactgta
gcaacgccacatccaaaaaactcgtacaaagtccaggagtctggaattgcagctgaaagc
ggagttcgcggctcacatttaattcctgcaagtacggagaaaataaagaaagataagagt
agcaccattcctcgaagacctgattcatttgtcaaaccatctactccattgcggcatgtg
aagctggatagtccatccaccaataaaaaatctgcagaacgcaatttcagacagagggac
atgccattgttatctcgtacagggatatctaatacttcttcaaccactaaaagatttcac
cccacagagtcggtaactgtgaaagatatatacactaccccgcaggctgtttctgtgcct
gttgtcgtatccagagacattttagaggacaaaacagcaggcaatgttaatagaggaatt
gcaggtagagccacagtcatagatgattttcacactcctgttcacttaagaaaacctttt
cctagtggtggtgctggtgatagtgtcagctcagtaagatccgtgctcactgagcctgat
gtttgctcggagggtttctctggcttaaagttctcctttggactaagtcaatatggcaag
aaagaaggatcggatggtacagataaaggagatattacacaaatagcagaaaacatggac
agagtagtgtcattggagcatccggtgcagtcaaatgatgacaagtcagcatttgaacca
ccatgctcaacgacagaaccatccagggtcaaatatgttagaggagtagccgtgccacta
gggaaaactaagtctcttgttgagaggtttgaaaagagagagagttctagcattgactgt
tcatcaccaactggctcttgcagtgaccacatagcaagagctgacagccctcccaccagt
ttggcaggaccaattcagggatatgaaaaggacttgtcaacagtggaagaagtgatgact
ccgattgatctggtgcggaaccatgaagaattcataaatgttgtaaaatctcggttgaca
aagctagagatgatgcggcatgtgttcaaccaaaatggtatcaaaggagcaatcactgca
gtggcaaagttaccagatatcgctgttcaagctgatgttgttagtactctcaaagggaag
cttggtcttttcaacctagatattttctcaggctttctgcctgttcttgcagggttactg
aacagcaggactgaaaggcatgctatcgtttctttagaactattattggatcttattaag
gtttttggaccagttatccgttcaacattgtcagctagttcaactgttagagtagatatc
caggctgaacagaggttgcagcgttgcacccggtgttttaaccatttgcaaaagattctg
caagctctacacccgttgattatgcggggtggtcaatcggcacaacttgctgaagaacta
aacatgtctctgcaagacctggtggtgttctaa

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