Brachypodium distachyon (stiff brome): 100821508
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Entry
100821508 CDS
T01717
Name
(RefSeq) transcription initiation factor TFIID subunit 12b
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100821508
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bdi03021
]
100821508
03036 Chromosome and associated proteins [BR:
bdi03036
]
100821508
Transcription machinery [BR:
bdi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
100821508
Coactivators
SAGA/TFTC/STAGA complex
100821508
Chromosome and associated proteins [BR:
bdi03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
100821508
STAGA complex
100821508
TFTC complex
100821508
SAGA complex
100821508
SLIK complex
100821508
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIID_20kDa
RovC_DNA-bd
CBFD_NFYB_HMF
Motif
Other DBs
NCBI-GeneID:
100821508
NCBI-ProteinID:
XP_003571319
UniProt:
I1HYE8
LinkDB
All DBs
Position
3:complement(5399132..5401046)
Genome browser
AA seq
435 aa
AA seq
DB search
MADPSSAAAAAASKASGQFAASVSSPQNPNPQIPPSPSAQVDPAAAAAGGRSMDPGPQLQ
APSPAQAADGVGRFGGIHRSGPASRGPAVVGQLPRYAAAAGMSFPAAGAQVSQQLSPIAA
MLGQGQPRMLQGQGSAAHYGLQGLQFQSPMMAQPSQRGTVQGAQFSTANAAQGGQSMGGG
VMAMGTSGLNQMRPNGISSPYGAQQRFAPGQMRPQQLSGSPQIGHTMQMSPMQQQQQQQW
PKQMQSTTASPAPSHKFQQEQMMLLIHQLRQRGLNDQQIAHTIKQIPRVNAQQLNQQQLR
QQQQSPRMPPSASQNPAGLAGLQPVAGLQPGVAPLSGGAVAGVSTSRPVAPGTSQLLGKR
KIQDLVAQLDPLGKVDPEVEDLMLEIADDFITSATAFACKLAKHRKSSVVEAKDMLLHLE
KHWHLSVPGFSQKRM
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atggcggacccgtcatccgccgccgccgccgccgcatcgaaggcgtccggccagtttgca
gcctctgtctccagcccgcagaaccccaacccccaaatccctccgtccccttccgcgcag
gtcgacccggccgcggctgctgcaggaggcagatccatggaccccgggccgcagctgcag
gcgccttcgcccgcgcaggcggctgatggcgtggggcgcttcggcgggatccaccgctct
ggcccggcctcccgcggccccgccgtcgtcggccagcttccacggtacgcggcagcggcc
gggatgagcttcccggccgccggagctcaggtgagtcagcagctatctccgatcgcggcc
atgcttgggcaggggcagccgaggatgctgcaagggcagggcagcgcggcacactacggg
ctccaggggctccagttccagtcaccgatgatggcgcagccaagccagaggggcacagta
caaggcgcacaattcagtactgcgaatgcagctcaaggcggccaatccatgggaggagga
gtcatggctatgggtacttctgggttgaaccagatgagaccaaatggaatatcatcccca
tatggtgctcagcaacgttttgcccctggacaaatgaggccacagcaactatctggatca
ccccaaattgggcatactatgcaaatgtcgccaatgcaacagcagcagcagcagcaatgg
ccgaaacagatgcaatcgaccaccgcctcacctgctccttcgcataaatttcagcaggaa
cagatgatgttactgatacaccaacttcggcagagaggattgaatgaccaacagattgcg
cacacgataaaacagattccgcgtgtgaatgctcaacagctgaaccagcagcaacttcga
cagcagcaacaatctcctaggatgccgccatctgcctcccagaatcctgcgggcttggca
ggattgcagcccgtggcaggattgcagcctggggttgcacctttgtcaggcggagccgtg
gccggtgtaagcacaagtcgtccagtagctccaggaactagccagcttcttgggaagagg
aagatacaagatttggttgcgcagctggatcccctcggcaaggttgatccagaagtggag
gatctaatgctggagatcgccgacgacttcattacctcggcaacggcattcgcctgcaag
cttgcaaagcataggaaatcgtcggttgtggaagccaaggacatgctgctgcacctggag
aagcattggcacctgtctgtccctggattctcgcagaagaggatgtga
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