Brachypodium distachyon (stiff brome): 100821564
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Entry
100821564 CDS
T01717
Name
(RefSeq) autophagy-related protein 13a
KO
K08331
autophagy-related protein 13
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
100821564
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bdi04131
]
100821564
03029 Mitochondrial biogenesis [BR:
bdi03029
]
100821564
Membrane trafficking [BR:
bdi04131
]
Autophagy
Autophagosome formation proteins
ULK complex
100821564
Atg1 complex
100821564
Mitochondrial biogenesis [BR:
bdi03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
100821564
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
100821564
NCBI-ProteinID:
XP_003580237
UniProt:
I1J047
LinkDB
All DBs
Position
5:complement(20378656..20384273)
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AA seq
525 aa
AA seq
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MSGMSDSGAGGRAGAELMAEQFHLKVLHAVLAVRAPRPLAAAQAAAASASFRRRDRWFHL
PLHDPPPPPEAELLEAPPPGEPLVVDIHLAPAGSGGAGGEVVERWTVACEPWPDAAASAA
GEGMAVNRAYKRCITLLRSVYSTLRLLPAYRVFRLLCANQSYNYEMGYRVGSFAVPFSRA
EEAAMRSHRFLPVETQPGRLVVSVQYLSSLTAFNLEISSLSPSMLITNYVGSPAAEPMRA
FPASLTEATGSAFPQSYQQQRPHSWAPPALWPQPPMQQMRFSPPPLHYASPTPSPPTFSG
GYLRSPLRGESAPVTIPGERRSPVHRQNMLDPIKGLMLPPPSPRRGEKGAAGSQESPSEI
SRSFGRAEGLRMVDPYGSSSPGSKVKDSKDESGRFSALSSCDSPRQDDLDDADYPFAVDD
VDPPFSRPGSSDGKEAGDQAGSSSHKSQDAAVGSLVHLLRTARPLRDSSYSSQTAGVESS
EVASASSVMSRRTSDALEELQSFKAIRERLLSGSRAKERESPEKP
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcatgtcggactccggggcgggcggccgcgcgggggcggagttgatggcggaa
cagttccacctcaaggtgctccacgcggtcctcgccgtgcgcgcgccgcggccgcttgcc
gctgcgcaggcggcggccgcgtcagcgtcgttccgccggagagacaggtggttccacctc
ccgctccacgacccgccaccgccgcccgaggccgagctcctggaggcgccgccccctggg
gagccgctcgtggtggatatccacctggccccagccggcagtgggggagcaggaggggaa
gtggtggagaggtggacggttgcgtgcgagccctggccggacgctgcggcttcggcggcg
ggcgaggggatggctgtgaaccgggcgtacaagcggtgcataaccctgctgaggtcggtg
tattccacgctgcgcctgctcccggcgtaccgtgtcttccgtctcctctgcgccaaccaa
tcctacaactacgagatgggctaccgcgttggctccttcgccgtgcctttttcacgcgcc
gaggaggcagccatgcgctcccatcgcttcctccccgttgagacccagcctggccgtctt
gtcgtctccgtccagtacctctccagcctcactgcattcaacctagagatatcctccctc
tcgccctccatgttgattaccaactacgtaggcagcccagcagctgagccaatgcgtgcc
ttccctgcttcactcaccgaagccactggctctgctttcccacagtcctatcagcagcag
cgtccgcacagctgggctccgcctgcgctctggccgcaaccaccgatgcagcaaatgaga
ttttcaccaccgccattgcattatgcttcaccgacaccatcgccccccaccttttctggt
gggtacctgcggtcacctctaaggggggagtctgcaccggtgaccataccaggcgagaga
aggagccccgtgcaccgtcagaacatgctggacccaattaaagggttaatgctgccaccg
ccatctccgaggagaggagagaagggggcagcagggtcacaagagtcgccatcagagatc
agccggtcatttggtagggcagaaggacttaggatggtcgatccttatgggagctcttca
ccaggatccaaggtcaaggacagcaaggatgaatctggtagattctctgcactctcttct
tgtgattcccctcggcaagatgatctagatgatgcagattatccttttgctgtggatgac
gttgatccaccattctcccgacctgggagcagtgatggtaaggaagctggagatcaggca
ggttcatcatcccataaatcacaagatgcagccgttggctctctggttcacctgctgaga
acagcacgcccgctgcgtgattcgagctattcatctcaaacagcaggggtcgagtctagc
gaggtagcctcagccagttctgtcatgtcacgtaggacatctgatgcactcgaggagctc
cagtctttcaaagcaatcagggagagactgctgtccgggagtagagcaaaagagcgagag
tcgccggagaaaccatag
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integrated database retrieval system