Brachypodium distachyon (stiff brome): 100821602
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Entry
100821602 CDS
T01717
Name
(RefSeq) F-box protein SKP2A isoform X2
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100821602
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bdi04121
]
100821602
Ubiquitin system [BR:
bdi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
100821602
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_4
LRR_At5g56370
F-box-like
LRR_Zer-1
LRR_At1g61320_AtMIF1
Colipase-like
Motif
Other DBs
NCBI-GeneID:
100821602
NCBI-ProteinID:
XP_003568409
UniProt:
I1HJ84
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Position
2:complement(22639392..22643932)
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AA seq
359 aa
AA seq
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MVSTGSGREQAEIGGAMPTLSGWKDLPMELLMRIISVAGDDQMIVVASGVCTGWRDALGW
GVTNLSLSWCQQNMNSLMISLAHKFTKLQVLTLRQIKPQLEDSAVEAVSNYCYDLRELDL
SRSFRLTDRSLYALAQGCPRLTRLNISGCSSFSDSALIYLSCHCQNLKCLNLCGCVKAAT
DGALQAIARNCVQLQSLNLGWCEDITDEGVTSLASGCPDLRALDLCGCVLITDESVVALA
SGCRHLRSLGLYYCQNITDRAMYSLANSCVKRKPGKWDSVRTSSSKDIVGLANLNISQCT
ALTPPAVQAVCDSFPSLHTCPERHSLIISGCLSLTSVHCACGIQRLRSAGRALQPNHAY
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atggtgtctacaggcagtggaagggagcaggctgaaattggtggcgctatgcctacgttg
tcaggttggaaggacctcccaatggagctcctaatgcggattatatctgtagccggagat
gatcagatgattgttgtggcatctggtgtttgcactggctggcgtgatgcattgggatgg
ggggtcactaatctttccctctcatggtgccagcagaacatgaatagcttaatgatatca
cttgctcacaagtttacgaagcttcaagttctcactcttcgccaaatcaaacctcagctc
gaagacagtgcagtagaggctgtttccaactactgttatgatctacgtgagctagacctg
agcagaagctttaggcttactgaccgctccttgtatgcattggcccaaggttgtccccgg
cttacaagactgaacattagtggatgttccagcttcagtgacagtgccttaatctacctt
agttgccactgtcaaaatctgaagtgcttaaatctgtgtgggtgtgtgaaggcagcgacc
gacggagctttgcaggccatagcccgtaactgcgtgcagctgcaatctctaaacctaggt
tggtgtgaggacatcacagatgagggagttaccagcttggcatcaggttgccctgatctc
agggccctggatttgtgtggctgtgttcttataacagacgagagtgttgttgctcttgcc
agtgggtgccggcatctgcgatctttgggcctgtactactgccagaacatcaccgaccgt
gccatgtattcccttgcaaacagctgcgtgaagcgcaaacctgggaagtgggattcagtg
aggaccagcagctcaaaggacattgtggggctggcaaacctgaacatcagccaatgcacg
gccttgacacctccagctgttcaggcggtctgcgactccttcccgtcactccacacgtgt
cctgagaggcattctctcatcataagtggctgcctcagcctgacgtctgtccactgcgcc
tgcggcatccaacgactccgcagtgctggaagagccctacagcccaaccatgcctactga
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