Brachypodium distachyon (stiff brome): 100821625
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Entry
100821625 CDS
T01717
Name
(RefSeq) uncharacterized protein LOC100821625 isoform X2
KO
K11985
TRAF-interacting protein [EC:
2.3.2.27
]
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bdi04121
]
100821625
Enzymes [BR:
bdi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100821625
Ubiquitin system [BR:
bdi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100821625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_5
MIP-T3_C
zf-C3HC4
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-RING_UBOX
ATG16
DUF6278
zf_RING_Vps8
DivIC
FANCL_C
Pellino_RING
FUT8_N_cat
AATF-Che1
Motif
Other DBs
NCBI-GeneID:
100821625
NCBI-ProteinID:
XP_003573501
UniProt:
A0A0Q3Q1A6
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Position
3:complement(15251895..15255394)
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AA seq
590 aa
AA seq
DB search
MTAAAWPVCTICYDDLRPLSDQHLHCIPSCGHVFHALCLEQWLEYCPSVGAGGGKTKKGG
TCPICKSACGGAHPPTRLFFQSTGTCLTQAASPASPSQEADPEALAAEVARLEQKAASLG
RTLDEQRDGIQKLNAEVRRWKEEAAAAEAMGEKARKEKEFLQQLLNAKTEEVSRKTAECG
RLQERSLGLAKELAALKLSTDMNLEEEEILKLASLGNHGNLENAVDVLKRSLALRNKSYK
ELMVQCNQLGRSETRTQQRIEKAKEVISKLKTKVHDLQKELEEKENIVLRDLRSSKKFKA
DLNQTNPGDTTTNNAFPSAGYGQKVKPDEVMQDPYNENPHTNRFIPEANNDLNLKDNLDC
KISDVIDLDADDDPMIRCSARPFGNRGDTVDTRNQSSHYERGNKEPATFGCESSSYVAEE
TSFMKHTPATGKSTFQRNLMNTKLQNFQELPVLRSTSVTTSTWKKDTLTIGGISKQATRL
ASGTGPQQIHNLNSLSDDDFQAPRTNGLEAARKGVSKWCKGMAAPGSLSANANKGNLIAV
GPDGRGGKVKVLRDHGRFPDSKTPALWPKAQQKAGGRGGQFQIEHFFGKR
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccgccgcgtggccggtctgcaccatctgctacgacgacctccgcccgctctcc
gaccagcacctccactgcatcccttcctgcggccacgtcttccacgccctctgcttggag
caatggctggagtactgcccgagcgtgggggccggcggcgggaagacgaagaagggcggg
acgtgccccatctgcaagtcggcctgcggcggcgcccacccgccgacccgcctcttcttc
cagtccaccggcacgtgcctcacgcaggcggcgtcccccgcctcgccgtcgcaggaggcc
gacccggaggcgctcgccgccgaggtcgcccggctcgagcagaaggcagcgtccctcggc
cgcacgctcgacgagcagcgcgacgggatccagaagctcaacgccgaggttcgtaggtgg
aaggaggaggcggcggcggcggaggcgatgggggagaaggctaggaaggagaaggagttt
ctgcagcagctgctcaatgcgaaaacagaggaggtgtcgaggaagacggcggagtgcggg
aggttgcaggagaggagcctcggtctggcgaaggagcttgcggcactgaagctgtcgaca
gacatgaaccttgaggaggaagagatcctcaagctggcttcgctgggtaaccatggcaac
cttgagaatgcagtagatgttctgaagagatcgctcgctcttcgcaacaagagctacaaa
gaattgatggtccaatgcaatcagctaggaagatcagaaactcgtactcagcagaggatt
gagaaggccaaggaggtgataagtaagttaaagacaaaggtacatgaccttcagaaggaa
ctggaagaaaaggaaaatattgtcctcagggatttgaggtcttcaaagaaatttaaagca
gatttgaaccagacaaatccaggagataccacaactaataatgctttcccaagcgctgga
tatggccagaaagtgaagcctgatgaagtgatgcaggatccatacaacgagaatccacac
acgaatcggttcatccctgaagctaacaacgatctgaacttaaaagacaacttggactgc
aagatatcagatgtgatagacctagatgccgatgatgaccccatgataagatgttctgcc
aggccgtttgggaatcgtggtgatactgtggatacacgaaatcagtccagtcattatgaa
cgtggtaacaaagaacccgcaacatttggatgtgagtcttcctcatatgtagcagaggaa
acatcctttatgaaacacacaccggcgactggaaaatcaacatttcagcgtaacttaatg
aataccaaactgcaaaactttcaagagcttcctgttctgagaagcacgagtgttacaact
tcaacatggaagaaagatacactgacaattggtggcatctcgaaacaagcaactaggctg
gcttctggcactggacctcagcagattcacaatttaaattctctttctgatgatgatttc
caagcaccacgaactaatggtctggaggcggcaagaaaaggcgtcagcaaatggtgcaag
ggcatggcagcacctggatccctaagtgcaaatgctaacaagggcaatctgattgctgtg
gggcctgacggacgcggaggaaaggtgaaagtcctgagagaccacggtcggttcccggat
agcaagactccagcactgtggcctaaggcacagcagaaggctggaggcagaggtgggcag
tttcagatagagcacttctttgggaagagatga
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