Brachypodium distachyon (stiff brome): 100821633
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Entry
100821633 CDS
T01717
Name
(RefSeq) peroxisome biogenesis protein 1 isoform X1
KO
K13338
peroxin-1
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
100821633
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bdi04131
]
100821633
Membrane trafficking [BR:
bdi04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
100821633
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
PEX-1N
AAA_16
AAA_lid_3
AAA_14
AAA_22
ATPase_2
AAA_5
ORC-CDC6-like
Bac_DnaA
NPHP3_N
AAA_19
nSTAND3
DUF815
AAA_7
NACHT
RNA_helicase
AAA_2
TsaE
RuvB_N
AAA_33
RNA12
AAA_29
IstB_IS21
AAA_28
AAA_11
bpMoxR
Mg_chelatase
Rad17
FtsK_SpoIIIE
T2SSE
PEX-2N
Motif
Other DBs
NCBI-GeneID:
100821633
NCBI-ProteinID:
XP_003574917
UniProt:
I1I9D9
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All DBs
Position
3:43903269..43910862
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AA seq
1091 aa
AA seq
DB search
MASGGGMEVEVRVVGGARSCFVALPLHLIQALSRTSATGDLPPVLALDLRSPARARWSLA
WSGAASRSRAIEVAQELAECISLPDGTIAQLSVARSLTRADSVSIEPFSEDDWEILESRA
DLAEETILQQVGIVYEGMKFPLWLDGHNIVKFVVVSSTPKKSVVQLVPGTEVAVAPKKRK
EKYKDVQKQSSLNEQVQTKALLRVQAADNKYAHKFKYKGIELGVVLSCAVLIHPDTAART
SLGNLQLVTISSKSSPKGIQKGKEGAQKKGVLAPKERDQEMAVYVLFSDTVAKGHVMLPP
SLRHFISADTHSWVYVKTCSANVKKDEPVITISPLRFNKHGKDEHDNSDLGSQEMDTWRK
TRIHSENGDSFQDARNSEDILSAAVNSTSESMSEQKVLIKHWLIGQLKEMGLHAETSEMS
SVVLPAKVLIHFEVVDQKQNRGVEFLYLLTIAFENSGYNNSQENVEISWNARTDDLENLE
LNFGKVELGEAISVDSIMDDGFNNASKLTQCSLGWMETAISDVTKRLSVLLSSTALSLFN
RIKFPFPGHVLVHGPRGSGKTALIRTAAKYFEDHKEILAHIVYMDCSKLALGKAKEARQT
IEDSISEALLHSPSVIIFDDLDNVISVSSDPQVSQSSSSSDSLVRYFADIMDEYKDKTQN
SCGYGPIALMASVQSLQSLPQELTSSGRFDFHIELRALAIPEREALLKHHVEVHELHCSE
EVLSEVASKCDGYDAYDLEILVDRAVHAAASRFVLPSAYLNSMKPTLMKEDFLRALHDFL
PVAMRDLSKYAPDGNDGGWEDVGGLNEAVTIIKETLELPSKYPNVFTKAPVRLRSNILLY
GPPGCGKTHIVRAAAAACSLRFISVKGPELLNKYIGSSEQSVRDFFAKAAAAAPCLLFFD
EFDSIAPQRGTHSAGVSDRVVNQFLTELDGVETLTGVFVFAATSKPQLIDAALLRPGRFD
RLVFCDFPRWDERLEILKVHSRTVSLAEDAILEDVASLTEGFTGADLAAILTDAGLAAVH
EVLDNSRETGVPEREPCISKELLMSVAMKARPSTPADDKRGYDKEFGEFVSSRKSISTKA
RESKGKKVTLA
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcggtggtgggatggaggtggaggtgcgcgtcgtggggggcgcccggagctgc
ttcgtcgcgctgccgctgcacctcatccaggccctctcccgcacctccgccaccggcgac
ctcccgcccgtgctcgcgctcgacctccgctcccccgcccgcgcgcggtggtccctcgcc
tggtccggcgccgcgtcccggtcccgcgccatcgaggtcgcacaggagttggcggagtgc
atttcattgccagatggaacaatagctcaactgagcgtggctcgctctctgaccagagct
gactcggtcagtatagaacccttcagcgaggatgattgggagatactggagagccgtgct
gatttggctgaagaaacaatcttgcagcaggtcggcattgtttacgagggtatgaaattc
ccgctgtggttggatggccataatattgtcaagtttgttgtggtatcatctactcccaag
aagtcagttgttcaacttgtacctggaactgaagttgctgtggcacccaagaaacgaaaa
gagaaatacaaggatgtgcaaaagcaaagttcactgaacgaacaagttcaaacaaaggca
ctcttgcgtgttcaagcagcagataataagtatgcacataaattcaaatataagggcatt
gaactaggggtagttctgagctgtgctgtgctgatacatccagatacagctgcaaggact
tcacttggcaatctccagttggtcactatttcatctaaatcgtcaccgaagggtattcaa
aaaggaaaagaaggtgcacaaaagaagggtgttttggcacccaaagaaagggaccaagaa
atggcggtctatgtcttattctcagacactgttgccaaagggcatgttatgctgcccccg
tcccttcgtcacttcataagtgcagacactcattcatgggtttatgtgaaaacatgttct
gctaatgttaagaaggatgagcctgtaataacaatttctcctttacgttttaacaaacat
ggaaaagatgagcatgataacagtgatttaggcagccaagaaatggatacatggaggaaa
accagaattcattctgaaaatggtgattcctttcaggatgctcgtaacagcgaagatatt
ttgagtgcagctgtcaatagcacttctgaatccatgtcagaacagaaggttcttattaaa
cattggcttattgggcagctgaaagaaatgggcctacatgctgaaacttctgagatgagt
tcagtagttttaccagccaaagttttgatccattttgaagtggtggatcagaaacaaaac
agaggagttgagtttctatacctgctaacaattgcttttgagaactctggttacaacaat
tcacaagaaaatgttgagatatcttggaatgctcgaactgatgacctagaaaacttggaa
ctgaattttgggaaggtagagctgggtgaggctatatctgttgattccataatggatgat
ggcttcaacaatgcttccaagttgactcaatgttctttaggatggatggagactgcaata
tcagatgtgacaaaaaggctatctgtgctcttgtcatcaactgctctgagcttatttaac
agaataaagttcccctttcctggacatgttcttgtccatggtcctcgaggttctgggaaa
acggctttaataaggactgctgcaaaatattttgaggaccataaagagatactagcacac
atagtatacatggattgttccaaacttgcgcttggtaaggctaaggaggcaaggcagaca
attgaagacagcatttctgaggctctgctgcattcaccttcggttatcatatttgatgat
ctagacaatgtgatttcagtttcttcagatcctcaagtatctcaatcatccagttcttct
gattctttagtgagatactttgctgacatcatggacgagtacaaggataagactcagaat
tcatgtggatatggacctattgcactaatggcttcagttcaatcacttcagagtcttcct
caagagctaacttcctctgggagatttgatttccacattgagcttcgtgctcttgccatt
cctgagcgtgaagcactgttgaaacatcatgttgaggtgcatgagttacattgttctgag
gaagttctttcagaagtagcatcaaaatgtgatggctatgatgcatatgacttggagatt
ttggttgacagggctgtgcatgctgctgcttctcgctttgttcttccttctgcctatttg
aactctatgaaaccaacactgatgaaggaagacttcttgagagcattgcatgacttcctt
ccagttgccatgcgtgatctttcaaagtatgctcctgatggtaatgatggcggttgggaa
gatgttggggggcttaatgaagcagtaactattattaaagagactcttgaattaccatca
aaatacccaaacgtctttactaaggcacctgtccggttgcgatcaaatatcctcctgtat
ggaccacctggatgtggcaaaacacatattgtgagagctgctgctgcagcttgttctctg
cggttcatttcagtcaagggtccagagctgttgaataagtacatcggttcttctgagcaa
tctgttcgtgacttttttgcaaaggcagcagcagcagcaccttgcctgctattctttgat
gaatttgactctattgcaccccaacggggaacacacagtgctggagtttctgatcgtgtt
gttaatcagttcttgactgaactagatggcgtggaaaccttgactggagtatttgtcttc
gctgctacgagtaaaccacaattaattgatgctgcactcttgcggcctggaagatttgat
cgtcttgtcttttgtgattttccacgatgggacgagcgtttggaaatcctgaaagtgcat
tctcgaacggtttcactagcagaagatgccattctggaagacgttgcttccttaactgaa
ggattcactggcgctgatcttgcggcaattctaacagacgctgggttggcggctgtccat
gaagttctggacaacagcagagagaccggcgtcccagaaagagaaccgtgtatcagcaaa
gaacttctcatgtctgttgctatgaaagctcgaccttctacgccagccgatgataagagg
gggtacgataaggagtttggcgaatttgtatcgtccaggaagtctatttccacaaaggct
agagaatcgaaaggcaagaaggtgacgttagcttga
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