Brachypodium distachyon (stiff brome): 100821673
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Entry
100821673 CDS
T01717
Name
(RefSeq) 26S proteasome regulatory subunit 10B homolog A isoform X1
KO
K03064
26S proteasome regulatory subunit T4
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
100821673
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
bdi03051
]
100821673
Proteasome [BR:
bdi03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
100821673
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Prot_ATP_ID_OB_C
AAA_16
AAA_5
AAA_22
RuvB_N
AAA_2
nSTAND3
TIP49
DUF815
AAA_7
Parvo_NS1
RNA_helicase
Mg_chelatase
AAA_28
AAA_14
AAA_3
IstB_IS21
TsaE
NPHP3_N
NACHT
Sigma54_activat
AAA_24
PhoH
AAA_33
bpMoxR
ABC_tran
AAA_18
ATPase
ATPase_2
AAA_11
Motif
Other DBs
NCBI-GeneID:
100821673
NCBI-ProteinID:
XP_014751877
LinkDB
All DBs
Position
1:complement(56649104..56659442)
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AA seq
516 aa
AA seq
DB search
MDSCNNPAGNLAAAMKTCCFCMHVAVCKIISAVTTLVIGPKWKLLLGWCTNGSNSNQLRS
GLVAVVIGSGRVEFTATRLQSFLRSTAMAVIVDDAAYRTTAFGQYRLLLAICLDYDFFAR
TAREKVKNAKLEFEKTEDQLKVFQSCGQKIGEVVRQLDDERFIVKLGRGPRHEIVGCHSK
VNRKNLTPNTRVCLDPTTHTIMRTLPREVDPIVYNMLREDPGNVSYSAVGGLSDQIRELR
ECIELPLMNPDLFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDATFMKVVSSAIVRP
YIGESSRLIREMFAYARDNQPCIIFMDEIDAIGGRRFSVGSSADREIQRTLMELLNQLDG
FDELGKVKIIMATNRPDVLDPALLRPGRLDRKIEIPLPNEHSRLEILKIHAAEMAKHGEI
DYEAAAKLAEGFNAADMRNVCTEAGMSAIRAERDYVMNEDFMNVRYFASISPLNITLESI
RVSHFVLWLFFQAVRKLSDVKKLESSAQYNANFGKN
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atggacagctgtaacaatccagcaggaaatttagcagcagcaatgaagacttgctgcttt
tgtatgcacgttgcagtctgtaaaataatttcggcggttaccactcttgtcattgggccc
aaatggaagttacttctgggctggtgtacaaatggaagcaactcgaaccagttgaggtct
ggtctggttgcggtcgtgattggatctggtcgagtggagtttaccgcaacaagactccaa
agcttcctccgctccaccgccatggccgtgatcgtcgacgatgccgcctaccgtaccacc
gccttcggtcagtaccggttgctgctcgccatctgcctggactatgacttctttgcgcga
acagcccgagaaaaggtgaagaacgctaagctggagttcgagaaaactgaagatcagctc
aaggtgttccagagctgtgggcagaaaataggagaggtggtgcgccagcttgacgatgag
cgctttattgtcaagcttggcaggggccctcgtcatgagattgtcggctgccacagtaag
gtgaacaggaaaaacttgactccaaacacacgtgtctgtcttgacccgacgacacataca
atcatgcgtacacttccacgcgaggtggatcctatagtgtacaacatgcttcgtgaggat
ccagggaatgtcagctactctgctgttggagggctatcagatcagatcagggaacttagg
gagtgcatagagcttccactcatgaaccctgatttgttcctccgagttgggattaagcca
cctaagggagtgctcctttatggcccacctgggactgggaagacgctgctggcaagggct
attgcaagtaacattgacgccacctttatgaaggttgtctcaagtgctatcgtccgtcca
tacattggtgaaagttctcggttgataagggaaatgtttgcctatgcacgtgataatcag
ccatgcatcatcttcatggatgaaattgatgcaattggaggaagaagattcagtgtgggt
tcaagtgctgatcgtgagatccagaggacgctcatggaactgctaaaccagttagatggg
tttgatgaacttggaaaggtgaagataataatggcaactaaccggccggatgttctggac
cctgctctcttacggcctggacgtctggatcgaaaaattgaaattcctcttcctaacgaa
cattcaaggctcgaaatcctcaaaatccatgcagctgagatggccaagcatggtgaaatt
gattatgaagctgctgcaaagctagcagagggatttaacgctgcagatatgcgtaatgtc
tgcacagaagctggcatgtcagcaatccgagcagagcgtgactatgtcatgaatgaagac
ttcatgaacgtgcggtatttcgccagcatttcccccttgaatataacgttggaatccatc
agagtatctcattttgtcctatggctgtttttccaggctgttaggaaactcagcgatgta
aagaagctggagtctagcgcccaatacaatgccaactttggtaaaaattag
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