Brachypodium distachyon (stiff brome): 100821745
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Entry
100821745 CDS
T01717
Name
(RefSeq) transcription initiation factor TFIID subunit 12 isoform X1
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100821745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bdi03021
]
100821745
03036 Chromosome and associated proteins [BR:
bdi03036
]
100821745
Transcription machinery [BR:
bdi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
100821745
Coactivators
SAGA/TFTC/STAGA complex
100821745
Chromosome and associated proteins [BR:
bdi03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
100821745
STAGA complex
100821745
TFTC complex
100821745
SAGA complex
100821745
SLIK complex
100821745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIID_20kDa
CBFD_NFYB_HMF
Motif
Other DBs
NCBI-GeneID:
100821745
NCBI-ProteinID:
XP_014758692
UniProt:
A0A0Q3LHR2
LinkDB
All DBs
Position
4:45937808..45942542
Genome browser
AA seq
494 aa
AA seq
DB search
MDAPPPAQPDAAAPPSSTSASTPPSAPPPNPTPSVSTSSPAPTPAPAPSTAQTLEPATPS
HASARPPPPPRMRPPYTHLASPITMSSSSSSPATTAASSSATPAMPRGGVAIGLPAHPRG
PHAPAGYTGFVPPPPVAHQFSPLHRGPGQPPPPAPQLRQPAPGIQNIGMIGSINTSQLRP
GGLQQPRPGLPSSATPSPSGGQIPGSQKTPMHSLTRPLSISPSTALQQTQTNASAPFRPQ
QRPQVPQQRPYQVAQSAPVASHQQNVVSGQQQLPQHQLLQQQQQQQQQHQSQPQSSLQQS
QPQSSLPQSQQHATLKTQQQAAQTPVSLTQKADSPATQQATNTQLVDMASIDAAAGESSN
RLLSKRSIRELLAQIDPSESLDPEVEDVLIDIAEDFIESVGRFSCSLAKHRKSSTLEAKD
VLLHAERSWNITLPGFTGDEIKLYKKPHVNDIHRERLTLIKKSMASEGNTRSSAAQAASN
QKNQTPKPPATGSP
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgcctcctcccgcacagccggacgcggcggcgccgccctcctcgacctcagct
tcgaccccgccttccgcgccgccaccaaatcccacgccatccgtttccacttctagcccc
gctcccactcccgccccagctccatccaccgctcaaaccctagagcccgcaactcccagc
cacgccagcgcgcgcccgccgccgccgcctcgcatgaggccgccgtacacccacctagcc
tcgcccataacgatgtcctcctcctcctcctctcccgccacaaccgcggcctcctcctcc
gcgactccggcaatgccgaggggaggggtcgccattgggttgcctgcgcacccgcgtggg
ccgcacgcgccagccggctatactgggttcgtgcctccgccaccggtagctcaccaattc
agtcctttgcatcgcggccccggccagcccccgccgcccgctccacagcttaggcagcct
gcccctgggatccagaatattgggatgataggttccataaacacatctcagttgagacca
ggaggtctgcaacaaccaaggcctggtcttccatcatcagcaacaccatctccatctggc
ggccagatcccaggttcacaaaaaacccccatgcattctttaacaagaccactgtctatt
tctccttcgacggctttacagcaaactcagacaaatgcatctgcaccattcaggccccaa
caaaggccacaagttccacagcaaagaccataccaagttgcacagtctgcacctgtggcg
tcacatcaacagaatgtagtttcaggacagcagcagctaccacagcatcaacttttgcag
cagcaacaacaacaacagcagcagcatcaaagtcagccacaaagttccttgcaacaaagt
cagccacaaagttccttgccacaaagtcagcagcatgcaacactaaaaacccagcagcaa
gctgctcagactcctgtttcattgactcagaaggctgattctcccgctacacaacaagct
actaatacgcagctcgtggacatggcttccattgacgcagctgctggtgaatctagtaat
cggctactctccaagaggagtatacgtgaattgcttgcgcagatcgacccgtcggaaagt
ctggatcctgaagttgaagacgttcttattgacattgcagaagattttattgaatctgtc
ggtagattttcttgttctttagcaaaacatagaaagtctagtactttggaagcaaaagat
gtactcctccatgcagagagaagctggaatatcaccttgccaggctttacgggggatgaa
ataaaactatacaagaagccgcatgtgaatgatattcacagggagaggcttacactgatc
aagaagtcaatggctagtgaagggaacacaaggagctctgctgcccaagctgcaagtaac
cagaaaaaccagactccaaagccacctgccacaggttcaccatga
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