Brachypodium distachyon (stiff brome): 100821753
Help
Entry
100821753 CDS
T01717
Name
(RefSeq) nuclear pore complex protein NUP98A
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100821753
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bdi03019
]
100821753
03036 Chromosome and associated proteins [BR:
bdi03036
]
100821753
Messenger RNA biogenesis [BR:
bdi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100821753
Chromosome and associated proteins [BR:
bdi03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
100821753
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
100821753
NCBI-ProteinID:
XP_010237988
UniProt:
I1INY1
LinkDB
All DBs
Position
4:31767991..31773169
Genome browser
AA seq
977 aa
AA seq
DB search
MFGSTNPFGQQSSGGAFGQQASSNPFGGQAGGAFGQQASSNPFGGQTSAFGQTGGAASNS
FAPKPFGSSVTAFGQPSAPAFGATSTGAFGQLSAPAFGSTSTGAFGQQASPAFGSTLTGA
FGQQSAPMFGSTVTGAFGQQSAPAFGTTSTGAFGQQSTPAFGTTSTGAFGQQSAPAFGST
STGAFGQPSTAVFGTPSPSPFGSSTPAFGASPTPAFGATSSGFGSGSLFGQKPSFGGFGS
SPSQSSTFGSTFQQTQPAFGNSTFGATTPAFGSSSTSLFGASSNTTFGSTTPAFGSSGTG
TFGVNTAPASSFGTSASAFSFGSSPSFGQTTATTGTTSFGTNPFGSQAAATTFGQSSFGN
QSGGTRIQSYVQTPDPDSATSGTQPAAKFDSISAMPAYKEKSHEELRWEDYQRQDKGGPN
PSAAPAVNSFLPPQQNFQPNQPIAANTFAPKPSPFATTPSPFSSSTSTQSFGQPVGAFSA
NTSPSLFANSTSSIFNPPSTTTNPFSTGSSINNNTQSAGLFQPSPAITQQPFSNSFNQQA
STPAFSTSMFNTSSLGMTGGLFSNTSPPFATSTFQQPAPVQTTSSFSFQTQPGAFSGVSN
MMNLAPFGQQTTSQPNMVMQPTMVPSPFGTLPVMPRMSIGNGGSSPSIQYGISSLPVAEK
SLPSRTLSMVVPRHLSQRRIKLLPRKYNATSDGKVPFFADDEESPATPKADAFFIPRENP
RSLIIRSTEHWPSRTVLDRQSIPRDSADLEKHIDASVGRERNKAAMSPSRTAPVENRDDQ
HASSEPEASARHANGATIEKQQQQQQLMPKLLSQADYFTEPSLAELAAKERAEPGCCGRV
KDFVVGRRGYGSIKFLGETDVRGLDVESIVEFNQREVVVYKDDSKKPPVGEGLNRAAVVS
LLKIKCMNKKTGDQYTEGPRVDRYREMLAKKAEEQGAEFISFDAANGEWKFRVKHFSSYG
FAGAAQEEEAQGNSCGL
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atgttcggctctaccaacccattcgggcagcagtcgtccggtggcgcgttcgggcagcag
gcctcgagcaacccgttcgggggccaggcaggcggcgctttcgggcagcaggcctcgagc
aacccgttcgggggccagacgtctgcatttgggcagaccggcggcgccgccagcaacagc
ttcgcgcctaaaccctttggcagctcggtcaccgcctttggccagccatccgcccccgcg
tttggtgctacatccaccggcgcctttggccagctatccgcccccgcgtttggcagcacc
tcgactggcgcctttggccagcaagccagccccgcgtttggcagcaccttgaccggcgcc
tttggccagcaatccgcccccatgtttggcagcaccgtgaccggcgcatttggccagcaa
tccgcccccgcgtttggcactacatccaccggtgcctttggccagcaatccacccccgcg
tttggcactacatccaccggtgcctttggccagcaatccgcccctgcgtttggcagcacc
tcgaccggcgcctttggccagccatccacggccgtgttcggcaccccatcgccctctccg
ttcggcagctccacaccagcctttggcgcgtcgccaacccctgcgtttggcgccacatcc
tccggcttcggcagtggatctttgtttggacagaagccaagttttgggggttttggatcg
tctcctagccagtctagtacttttggtagcacattccagcaaactcaaccagcatttggc
aacagcactttcggtgccacaactcctgcatttggctcaagctcaacatccttatttggc
gcttccagcaacacaacatttggttcaacgactcctgcatttggatcttcaggcaccgga
acatttggtgtgaacactgctccagcttcttcgtttggcacatcagcaagtgcttttagt
tttggttcttcgccgtcttttggacaaacaacagctacaaccggtaccacttccttcgga
acaaatccatttggctcacaggcagcagcaacaacgtttgggcaatcttcatttggaaat
caatctggaggaaccagaatacagtcttatgtgcaaacaccagatcctgacagtgctaca
agtggcactcaacctgctgcgaagtttgattctatatcagcaatgcctgcatataaagag
aagagtcatgaagaattgaggtgggaagattaccagcgtcaagacaaaggtggaccaaac
ccttctgcagctccagcggtgaacagctttctacctccacagcagaattttcaaccaaat
caaccgatagcagctaatacgttcgctcctaagccctcaccttttgcaactacgccgagc
ccattttcttcatctacaagtacccagtcgtttggacaaccagttggtgcattctcagca
aacacttcaccatctctctttgcaaattccacttcttcgatattcaacccaccatcgaca
accacaaatccattcagtactggctcatccattaataataacactcaatcagctgggctg
tttcagccttcccctgcaattacgcaacagccatttagcaactcatttaatcagcaagca
agcactccagctttctccactagtatgttcaacacttctagtcttggaatgactggaggg
ctgtttagcaacacatctccacctttcgcaacatcaacatttcaacaacctgcccctgtt
caaactacaagctcgttctcattccagactcaaccaggtgcattctctggtgtttccaac
atgatgaatctggccccatttggacagcaaactactagccagcccaatatggtaatgcag
ccaactatggttccaagccccttcggaacacttccagtaatgcctcggatgtccattggg
aatggtggatcttcaccttctatccaatatggcatatcaagtttgccggttgctgagaag
tcccttccgagcagaactttatcgatggtggttcctaggcatttatcacagagaaggata
aaactgctgccacgaaaatataatgcgacatctgatggcaaggttcctttctttgctgac
gatgaagaatctcctgcaacaccaaaagcggatgcttttttcatccctagagagaaccca
cgaagtctgataatccgttcaaccgagcattggccttcacgtactgtgcttgacaggcag
tcaattccgagggattcagctgatcttgagaaacatatagatgcttctgttgggagggag
cgcaataaggctgccatgtcaccaagtcggactgccccagtggaaaaccgagatgaccag
catgcatcaagtgagcctgaggcttcggcgcgtcacgcgaatggtgccaccattgagaag
cagcagcagcagcagcagttgatgcctaagctgctctcccaggcagattactttacggag
cctagcctggcggagctagcggccaaagaacgtgccgagccaggctgctgcggccgggtg
aaggactttgttgtgggacgtcgaggctatggcagcataaaattcctgggggagacggac
gtgaggggcctcgacgtggagtcgatcgtggagttcaaccagcgcgaggtggtggtgtac
aaggacgacagcaagaagcccccggtgggcgagggcctgaacagggcggcggtggtgagt
ctcctgaagatcaagtgcatgaacaagaagactggggatcagtacacggagggtccgagg
gtggataggtacagggagatgctggcgaagaaggccgaggagcagggagctgagttcatc
tcgtttgacgctgccaatggagagtggaagttcagggtgaagcatttcagctcctacggc
tttgctggtgctgctcaagaagaagaagctcaaggcaattcctgtgggttgtag
DBGET
integrated database retrieval system
