Entry |
|
Name |
(RefSeq) protein PELOTA 1
|
KO |
|
Organism |
bdi Brachypodium distachyon (stiff brome)
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:bdi00001]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100821812
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:bdi03019]
100821812
Messenger RNA biogenesis [BR:bdi03019]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
100821812
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
2:43513827..43515950
|
AA seq |
377 aa
MKLVQSNFARDAPGYAKLLPKVDDDLWDAYNLILAGDSVEAVTFRKITRSGGRDAERVKL
TLEIAVDSVEYDKDGSVLRVRGRNISKNEHIQVGQFHTLELELKRPFVLRKELWDWPALD
TIRQSCDDTGANADLAVLLMQEGLAQLFLVGRSVAANRARVEAPIPRKHGSAAVSAYDAA
LKGFFERVLEAFLSHVDFQVVRCVVVASPGFTKEQFHGYMLLEAERRGLRAVLQNKARIV
LARAPSGYAHSLQEVLACPGVKALVKDTRLAQEAPALEEFFAMVIKDSDRACYGPKHVDV
AHERLAIQTLLFTDTMFRNREVAARRKCVDLAEAVKKQGGTVRVFSSMHVSGNQLEQLTG
IAAILRFPLPELDDIEM |
NT seq |
1134 nt +upstreamnt +downstreamnt
atgaagctcgtccaaagcaacttcgcccgcgacgcgcccggctacgccaagctactgccg
aaggtggacgacgacctgtgggacgcctacaacctgattcttgccggcgactccgttgag
gcggtgacgttccgtaagatcaccaggtccggcggccgcgacgcggagcgcgtgaagctg
acgctggaaatcgccgtcgactccgtggagtacgacaaggacggctccgtccttcgcgtc
cgcggcaggaacatcagcaagaacgagcacatccaagtcggccagttccacaccctggag
ctggagctgaagcggcccttcgtgctccgcaaggagctctgggactggccggcgctcgac
accatcaggcagtcctgcgacgacaccggtgccaacgccgacctggcggtgcttctgatg
caagaagggctcgcccagctcttcctcgtcgggcgaagcgtggcggcgaaccgggcgcgc
gtcgaggcgcccatccccaggaagcacggctccgcggccgtgtccgcctacgacgccgcg
ctgaagggcttcttcgagcgcgtcctggaagccttcctgagccacgtcgacttccaggtc
gttaggtgcgtcgtggtggcgagccccgggttcaccaaggagcagttccacggctacatg
ctcctggaggccgagcggcggggcctgcgcgccgttctgcagaacaaggcccggatcgtg
ctggcccgtgcgccctcgggctatgcgcacagcctccaggaggtcctggcctgccccggc
gtcaaagcgctcgtcaaggacacgcggctggcgcaggaggcgcccgcgctggaggagttc
tttgccatggtcataaaggactccgacagggcttgctacgggccaaaacatgtcgacgtc
gcgcacgaacgcctggccatccagaccctgctgttcacggacaccatgtttaggaacaga
gaagtcgccgccaggcgcaagtgcgtcgacttggctgaagccgtgaagaagcaaggcggc
accgtgcgggtgttttcgtccatgcatgtctccggcaatcagctggagcagctgacgggg
atagcggccatccttcgctttcccctgccggagttggacgacattgagatgtga |