Brachypodium distachyon (stiff brome): 100821830
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Entry
100821830 CDS
T01717
Name
(RefSeq) choline transporter protein 1
KO
K15377
solute carrier family 44 (choline transporter-like protein), member 2/4/5
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bdi02000
]
100821830
04147 Exosome [BR:
bdi04147
]
100821830
Transporters [BR:
bdi02000
]
Solute carrier family (SLC)
SLC44: Choline-like transporter
100821830
Exosome [BR:
bdi04147
]
Exosomal proteins
Exosomal proteins of bladder cancer cells
100821830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Choline_transpo
DUF4501
Motif
Other DBs
NCBI-GeneID:
100821830
NCBI-ProteinID:
XP_003573246
UniProt:
I1I084
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All DBs
Position
3:11627483..11631702
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AA seq
709 aa
AA seq
DB search
MRWPLGAIIGRHASAAAAGAGGEKDAGAGAGVIRHDRKCRDLPFLALFAAFWVAMIVNSS
FGFNQGNPLRLTFGLDYKGNICGSKHGDPNLHELDVRYWMNPNQVYQSGLKSNQINLPDA
KAICLMECPYPAEDGLNFVCDYPDGDIRLSVDDWIDRDYDYFEYLTPDMRNSSLQLQGPC
YPIIFPSINVYWSCQFIARPSNVSLKHWQQMGGVSIDANMLIDKTIHNAVNSKSSVLKRY
VADIGKSWPVLIVCGGLLPLLLSLIWLAMIRYFVSGMPWVTVVIFNVLVISVTMFFYIKA
GWIGNDPLTVVIGASDPYVSISGREINHLHVAAVLMTVVMIIAFLTSIAIVRRILIATSV
LKVAAKVIGEVHALIIFPIVPYFVLAIFYMLWFSATLHLFSAGQVLRNDCNSNCCSFDLK
LGKVNCDNCCGYSIHYTPHIGLAILFHLFGCYWATQFFIACSSTVIAGSVASYYWARDEI
SHDIPFHTVVSSLKRLLRYSLGSVALGSLMVSVVEWVQFVLKSIRRRLKVVDSARESCFG
KTVSSSSHCCLGCIDWTIKSVNRNAYIMIAITGKGFCKASELATGLIMNNILRIGKVNVI
GDVILFLGKLCVSLSSVLFAFLMLDNHKYRSSHSKISSPLFPVLLCWALGYAVAQLFFGV
VETSVETVVLSFCQDAEEHQGDAQYAPPVLMETLLGGDPTQLQRLTAQP
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgcgatggccactgggcgccatcattggccgccacgcctccgccgccgccgccggagca
ggaggagaaaaggacgccggagccggagccggcgtcattcgccacgaccgcaagtgccgc
gacctgccattccttgccctcttcgccgccttctgggtcgccatgattgtcaactccagc
ttcggcttcaaccagggcaacccactcaggctaacatttggacttgactataaaggaaac
atatgtggcagcaaacatggtgatccaaatttgcatgagcttgatgttcgttattggatg
aatcccaaccaggtctaccaaagtgggctgaaaagcaaccaaatcaatctacctgatgcc
aaggccatatgtctgatggaatgcccctatcctgcagaagatgggttgaactttgtctgt
gattatccagatggtgacatacggctctctgttgatgattggattgacagggactatgat
tactttgagtatctcacaccagacatgagaaacagttctcttcagttgcagggtccatgt
taccccatcatatttccaagtataaatgtctactggagctgccagtttattgcacggccg
tccaatgtctctctgaagcattggcagcagatgggcggcgtcagcattgatgcaaacatg
cttattgacaaaacaattcacaatgccgtcaactctaagtcctctgtcttaaagagatat
gttgcagatattgggaagtcctggccagtgttaatcgtttgtggtggattactcccactt
ttactatcattgatatggttagcgatgatacgctattttgtttctgggatgccatgggta
acagtggtcatttttaatgtccttgtaatatcggttacaatgttcttctatataaaagct
ggctggattggcaatgatcccttaactgttgtaatcggtgcaagtgatccatatgtcagc
ataagtggacgggaaataaatcacctgcatgttgctgcggttttgatgaccgtagtaatg
atcattgctttcctgacttcaatagctattgttcgacgtatactgatagcaacgtctgtc
ctgaaggtggctgcaaaggtcattggtgaagtccatgcattaattatttttccgatagta
ccatacttcgtgcttgctatcttctatatgttgtggttttcagccacactgcatcttttc
agcgctggtcaagtgttacgaaatgattgcaattcaaattgctgttcgtttgatctcaag
ttgggaaaagtaaactgtgacaactgctgcgggtacagtatccattacaccccacatatt
ggccttgccattctcttccacctgtttggctgttactgggcaacacaattcttcatcgcg
tgctcttcaactgtaattgctggatctgttgcttcatactactgggcgcgtgatgaaata
tcgcatgacataccgtttcatacggtggtgtcttccctgaagcgcttgttgcgctatagc
cttggatctgtggctctaggttcactgatggtatctgtcgtagagtgggtgcagtttgta
ctcaaatcaattcgccgtaggctgaaagtagttgattcagcgcgtgaaagctgctttggg
aagacagtgtcatcctcatctcactgctgcctcggttgcatagattggaccatcaaatca
gtgaacaggaatgcttacatcatgattgccattacagggaaagggttctgcaaggcttcg
gagctggcgaccgggttgataatgaacaacatactgcgcatcggaaaagtgaacgtcatc
ggtgacgtgatcctgttcctgggaaagctgtgcgtgagcctgtcgagcgtgctcttcgcg
ttcctgatgctggacaaccacaagtacaggtcttctcacagcaagatatcgtcaccgctg
ttccccgtgctgctgtgctgggcgcttggttacgctgtggctcagctcttcttcggcgtg
gtggagacgtccgtggagacggtggtgctgtccttctgccaggacgcggaggagcaccaa
ggggatgcgcagtacgcgccccctgtgctgatggagaccctgctgggtggtgacccaaca
cagcttcagagactcaccgcccagccttga
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