Brachypodium distachyon (stiff brome): 100821858
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Entry
100821858 CDS
T01717
Name
(RefSeq) transcription factor-like protein DPB isoform X2
KO
K04683
transcription factor Dp-1
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
100821858
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bdi03000
]
100821858
03036 Chromosome and associated proteins [BR:
bdi03036
]
100821858
Transcription factors [BR:
bdi03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, DP
100821858
Chromosome and associated proteins [BR:
bdi03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
100821858
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DP
E2F_TDP
Motif
Other DBs
NCBI-GeneID:
100821858
NCBI-ProteinID:
XP_003558793
UniProt:
I1H9M5
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Position
1:complement(72166324..72170439)
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AA seq
383 aa
AA seq
DB search
MVSGIAHRTDEDGGRGASSFPRPPQPSAARTPLGTPPPSSGAHSASTSGGSAGSPSGRSE
QHGPAATGTGPTPEAAAATASTPASEGTFLRLNNLDINGDDAPSSQAPVSKKKKRRASAV
GPDKGGRGLRQFSMKVCEKVESKGRTTYNEVADELVAEFADPNNNMESPDPDNPNAQQYD
EKNIRRRVYDALNVLMAMDIISKDKKEIQWKGLPRTSINDIEELQTELVGLKGRIEKKSA
YLQELQDQYLGMQNLIHRNEGMYGSGNIPSGGVALPFILIQTRPHATVEVEISEDMQLVH
FDFNTTPFELHDDSYVLKAMNSCGKEQNDGTPDPRLNGCEDSSMANIYWDQLQQSAMANN
GTARFPSSPPVPGILKGRVKHEH
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atggtctccggcatcgcccaccgcacggatgaggacggcggccgtggcgcctcgagcttc
ccgcgcccgccgcagccgtccgccgctcggacgcccctgggcacgccgccgccctccagc
ggcgcgcactccgcctctaccagcggcgggagcgccggctccccgtccggccgcagcgag
cagcacggccccgccgccaccggcacggggccgacccccgaagcggcggcggcgacggca
tccacgcccgccagcgagggcaccttccttcgtctcaacaacctcgacatcaacggcgac
gacgcgccttcatcgcaggctcccgtgagcaagaagaaaaagagaagagcatcagcagtt
ggtcctgataaaggtggtcggggattgcgacagttcagtatgaaagtttgcgagaaagtt
gaaagtaaagggagaacaacatacaatgaagtggcagatgaacttgttgcggagtttgcg
gatcccaataataacatggaatctccagatcctgataatcccaatgcacaacaatatgat
gagaaaaacatacgaagaagggtttatgatgcattgaatgttctgatggctatggacatt
atatccaaagataagaaggaaatacagtggaagggcttgcctcggactagtataaatgat
attgaagaactgcagacagagctcgtggggctgaaaggtaggattgagaagaaaagtgct
tatttgcaggagctacaagaccaatatctaggtatgcaaaacttaatacaccgaaatgaa
gggatgtatggttcaggaaacattccttctggcggagtggccttgccatttatcctgatc
cagacacggcctcatgcaactgttgaagttgagatctcagaagatatgcaactggtgcat
tttgactttaataccactccatttgagttgcatgatgactcgtatgtgctaaaagcaatg
aactcctgtgggaaagaacagaatgatggcactcctgacccaagattaaatggatgcgag
gactcaagcatggcaaatatttattgggatcagttacaacaatctgcaatggcgaataat
ggtacagctagatttccaagctcaccccctgttccaggaatactgaaagggcgcgtgaag
cacgagcactag
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