Brachypodium distachyon (stiff brome): 100821881
Help
Entry
100821881 CDS
T01717
Name
(RefSeq) protein PELOTA 1 isoform X1
KO
K06965
protein pelota
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100821881
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bdi03019
]
100821881
Messenger RNA biogenesis [BR:
bdi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
100821881
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_1
eRF1_3
eRF1_2
Motif
Other DBs
NCBI-GeneID:
100821881
NCBI-ProteinID:
XP_003580736
UniProt:
I1J2W5
LinkDB
All DBs
Position
5:26514963..26524524
Genome browser
AA seq
378 aa
AA seq
DB search
MKLVHRNFARNGPGSAKFLPEEEDDLWHAYNLIAVGDTLQAVTVRKVLRDSASGGRDAER
VKLKLEIVVESVDYDKEGNVLRVRGKNITENDHVKIGQFHTLELELKRPFVLRKENWDWL
ALDTIQQACDPTASADLAVILMQEGLAHLFLIGRSITATRARIETSIPRKHGPAIAGYES
ALKKFFEHVLQALLKHIDFEVVQCVVIASPGFTKDQFRDYMHLEAARRDLRVIIENKSRI
ILAHAPSGYKHSLKEVLDSPSVMSLIKDTKAAQEVQALKEFFAMLTNDSARACYGPKHVE
IANDRLAIQTLLMTDSLFRNTDIATRKKYVNLVESVKKFGGIVHIFSSMHVSGEQLAQLT
GIAAILRFPLPDLEDIEM
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcgtccaccgaaacttcgcccgcaacggccccggctccgccaagtttttgccg
gaggaggaggacgacctgtggcacgcgtataatctcatcgccgtcggggatactctccag
gccgtcactgttcggaaagttctgagagattcagcttctggagggcgtgatgcggagcgt
gttaagctaaagttagaaattgtagttgagtctgtagattatgacaaggagggaaatgtc
ttgcgtgtccgtggcaaaaatattaccgagaatgatcatgtgaaaattggccagtttcat
actttagagctcgagctgaagagacctttcgttctacgaaaggaaaattgggactggtta
gcacttgataccatccaacaagcatgtgaccctaccgcaagtgctgatctagcagttatt
ctcatgcaagaaggacttgcccacttattcctcatcgggagaagcataacagcaaccagg
gcacgtattgaaacatcgattcctaggaaacacggacctgccattgctggttacgaatcg
gccctcaagaagttctttgagcatgttttgcaagctttgttgaagcatattgattttgaa
gtagtccaatgtgttgtgattgcaagcccaggttttactaaggatcagtttcgtgattat
atgcatcttgaagctgcacgacgagacttaagagtaataattgagaacaaatcacgcatt
attcttgcacatgcaccctcaggttacaagcatagcttgaaggaagttttggatagccct
agtgtgatgtcactcataaaagatacaaaagcggcacaggaggtacaagctttgaaggag
ttcttcgctatgcttactaatgactcggcccgagcttgttatggacctaagcatgttgag
attgcaaatgaccgtcttgcgatccagactcttctaatgacagacagtttgtttcggaac
actgacattgctacaaggaaaaagtacgtgaatttggttgaatcggtcaagaaatttggt
ggtatcgtgcacatattttcttcaatgcatgtctccggcgaacaattagcgcagttgacc
ggaatagcagctatacttcgatttcccctgccagatttggaggacatcgagatgtga
DBGET
integrated database retrieval system
