Brachypodium distachyon (stiff brome): 100821930
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Entry
100821930 CDS
T01717
Name
(RefSeq) replication factor C subunit 3
KO
K10756
replication factor C subunit 3/5
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03030
DNA replication
bdi03410
Base excision repair
bdi03420
Nucleotide excision repair
bdi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
100821930
03410 Base excision repair
100821930
03420 Nucleotide excision repair
100821930
03430 Mismatch repair
100821930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bdi03032
]
100821930
03036 Chromosome and associated proteins [BR:
bdi03036
]
100821930
03400 DNA repair and recombination proteins [BR:
bdi03400
]
100821930
DNA replication proteins [BR:
bdi03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
100821930
DNA Replication Termination Factors
ELG1-RFC complex
100821930
Chromosome and associated proteins [BR:
bdi03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
100821930
DNA repair and recombination proteins [BR:
bdi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
100821930
Check point factors
HRAD17(Rad24)-RFC complex
100821930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
Rad17
DNA_pol3_delta2
RCF1-5-like_lid
AAA_16
AAA_22
AAA_assoc_2
DNAX_ATPase_lid
AAA_11
AAA_30
AAA_5
DUF815
RuvB_N
ATPase_2
AAA_7
AAA_14
bpMoxR
AAA_24
AAA_19
nSTAND3
ResIII
AAA_3
ABC_tran
AAA_28
MCM
TniB
AAA_25
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
100821930
NCBI-ProteinID:
XP_003570529
UniProt:
I1IEN4
LinkDB
All DBs
Position
3:56805064..56809663
Genome browser
AA seq
358 aa
AA seq
DB search
MAGAATTAPMDIDAAAPPHSKGKAPLSAAAAVRSSPWVEKYRPQSLADVAAHRDIVDTID
RLTDENRLPHLLLYGPPGTGKTSTILAVARKIYGSQYGNMILELNASDERGIGVVRQQIQ
DFASAHSLSFGAKPAVKLVLLDEADAMTKDAQFALRRVIEKYTRSTRFALICNHVNKIIP
ALQSRCTRFRFAPLDGSHVSERLQHIIKSEGLDVDEGGLTALVRLSSGDMRKALNILQST
HMASQQITEEAVYLCTGNPMPKDIEQIAFWLLNEPFSTSFKYISDMKMRKGLALIDIIRE
VTMFVFKIKMPCNVRVKLINDLADIEYRLTFACNDKLQLGALISTFTSARTAMVAAAD
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atggcaggagccgccaccaccgctccgatggacatcgatgccgccgcgcctccgcactcc
aagggcaaggcgccgctctctgcggccgccgccgtcaggtcctcgccctgggtcgagaag
taccgcccccagtccctcgcggacgtcgctgcccaccgcgacatcgtcgacaccattgat
aggcttacagatgagaataggcttccacatttgttgctctatggtccgcccggcactggg
aaaacatcaaccatactagctgttgccaggaaaatatatgggtcacaatatggcaacatg
attctcgaactcaatgcatcagatgaacgtggtattggtgttgtaaggcagcagatacag
gacttcgccagtgcacacagcctctcttttggagcaaagccagctgttaagttagtcctc
ctggatgaagcagatgccatgaccaaggatgcacagtttgcattgcgaagagtcattgag
aagtatacaaggagcacaagatttgcactcatctgcaaccatgtgaacaaaatcatccca
gcactacaatcaaggtgcactaggtttagatttgccccacttgatggctctcatgtcagt
gagcgtcttcaacatataattaaatctgaggggcttgatgttgacgagggtggcttgaca
gccctggtgaggttaagcagtggtgacatgaggaaggctttgaatatattgcagtcaaca
cacatggcatcccagcaaataacagaagaagctgtctacctttgcacgggaaaccccatg
cccaaagacattgagcagatagcgttttggttactaaatgaaccgttttcgaccagcttc
aaatatatatcggatatgaagatgagaaaaggtctggccttgattgatatcatacgggag
gtcactatgtttgtgttcaaaataaaaatgccatgcaatgtacgagtaaagctgattaat
gatttggcagatatcgagtatcggctaacattcgcttgcaatgacaaactacagcttggg
gcactgatctcaactttcacgagtgctcgcacggctatggttgctgctgcagactag
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integrated database retrieval system
