KEGG   Brachypodium distachyon (stiff brome): 100821968
Entry
100821968         CDS       T01717                                 
Name
(RefSeq) RNA-binding protein Y14B-like
  KO
K12876  RNA-binding protein 8A
Organism
bdi  Brachypodium distachyon (stiff brome)
Pathway
bdi03013  Nucleocytoplasmic transport
bdi03015  mRNA surveillance pathway
bdi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bdi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100821968
  09122 Translation
   03013 Nucleocytoplasmic transport
    100821968
   03015 mRNA surveillance pathway
    100821968
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bdi03019]
    100821968
   03041 Spliceosome [BR:bdi03041]
    100821968
Messenger RNA biogenesis [BR:bdi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     100821968
Spliceosome [BR:bdi03041]
 Complex C
  Other components
   EJC/TREX
    100821968
SSDB
Motif
Pfam: RRM_1 RRM_5 RRM_3
Other DBs
NCBI-GeneID: 100821968
NCBI-ProteinID: XP_003559268
UniProt: I1GLV0
LinkDB
Position
1:3051231..3055383
AA seq 193 aa
MGASATEDVEFVEYDLEDDDDGMDEDDQAAARALPVPHIATPAVARTRGRLLGRSPSILS
SSRDRFDSIPGPGTSQHGPQRSIEGWIILVSGVKEDAEESDLFDAFRDFGRVKDLHFNLE
RRTGYGKGYALVEYESFEEAKTAIKAMNGRQLLTKTIHVDWAFNRGPIQKVISTRPSRPR
SRTPPRRLAALTY
NT seq 582 nt   +upstreamnt  +downstreamnt
atgggggcgtctgcaacggaggacgtggagttcgtggagtacgacctggaggacgacgac
gacggcatggacgaggacgaccaggccgcggcccgcgcgctccccgtgccccacatcgcc
acccccgccgtggctcgcacccggggacgcctcctcggccgcagcccctccatcctctcc
tccagccgcgaccgcttcgactccatccctggccccggcacctcccagcacggcccgcag
cgctcaattgaaggatggataatactcgtctcaggagtcaaagaagatgcggaagaaagt
gatctattcgatgctttccgtgactttggtcgtgtcaaggacttgcatttcaatctggaa
cgccgcactggatacggcaagggatatgcattggttgaatatgaaagttttgaggaagca
aaaactgcaatcaaagcaatgaatgggaggcagctgttaacaaagactatccatgttgat
tgggcattcaacagaggtcctatacagaaggtcatcagtacaaggccatcacgtccacga
tctaggactccacctcgcaggcttgctgccttgacatactga

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