Brachypodium distachyon (stiff brome): 100822001
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Entry
100822001 CDS
T01717
Name
(RefSeq) DNA mismatch repair protein MSH4 isoform X1
KO
K08740
DNA mismatch repair protein MSH4
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bdi03036
]
100822001
Chromosome and associated proteins [BR:
bdi03036
]
Eukaryotic type
Meiosis-specific proteins
Others
100822001
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
TK
AAA_27
AAA_29
Motif
Other DBs
NCBI-GeneID:
100822001
NCBI-ProteinID:
XP_003563107
UniProt:
I1GUD4
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Position
1:complement(22454864..22468105)
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AA seq
811 aa
AA seq
DB search
MKEDATGSGGGGRVVGVGDRSSFVIGLIENRAKEVGVAAFDLRSASLHLSQYIETSCSYH
NTKTLLHFYDPMVVIVPPNKTAADGMVGVSELVDKNYPANKKVTVARGCFDDTKGAVMVK
NLSARDPSALGLDTYCKQYYLCLAAASATIKWIESEKGVIITSHSLSVTFNGSFDHMNID
STSVQTLEIIDPLHTELWGTSNKKKSLFQMLKTTKTTGGCRLLRANLLQPLKDIQTINTR
LDCLDELMSNEELFFGLTQGLRKFPKESDKVLCHFCFKPKKITDEIPKPANGRKSQLLIS
DIIVLKTALDAIPFLSKVLKGAKSFLLQNIYQTVCENPKYARMRKRIGDVIDEDAVHSRA
PFAACTQQCFAIKAGIDGLLDVARRSFCDTSEAIHNLATKYREECQLPNLKIPYNNRLGF
YFIIPQKDITGKLPSKFIQVVRHGKNVHCSSFELASLNARNKSAAAECFLRTELCLEGLI
SEIREDIGILTLLAEVLCLLDMIVNSFANTISTKPVDRYTRPEFTDDGPMAINAGRHPIL
EGLHTDFVPNNIFLSEASNMVLVMGPNMSGKSTYLQQICLIVILAQVGCYVPAQFASLRV
VDRIFTRIGTGDNVENNSSTFMTEMKETAFIMQNVSSKSLVVVDELGRATSSSDGLAIAW
SCCEHLLSLKAYTVFATHMEGLSELATMYPNVKTLHFEVNLRNNRLDFKFQLKDGLRRVP
HYGLLLARVAGLPASVVDTATNITSRITEQEMVRMDANCEQYRPLQMAYQAAQRLICLKY
SNQGDEYIREALQDLKESYAAGKLTRKKEMR
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaggacgctaccggcagcggcggcggcggacgggtcgttggcgtcggcgatcgg
tcgagcttcgtgatcggcctcatcgagaaccgagccaaggaggttggcgtcgcggccttt
gatttgagatcagcctcactacacctatctcagtatatcgagaccagctgttcataccat
aatacaaaaacactactgcatttctatgatccgatggttgtaattgtgcccccaaataaa
acagcggcagatggtatggttggagtttcggagctggttgataaaaattacccagcaaac
aaaaaggtcacagtggcacgtggttgctttgatgataccaagggggcagtcatggtgaaa
aatctttcagctagagacccatctgcacttggtttggatacttattgcaagcagtactat
ctttgtcttgctgcggcctctgcgacaattaagtggatagaatcagaaaaaggcgtaatt
attactagccattcattatcagttacattcaacggctcgtttgaccatatgaacattgac
tcaactagcgttcaaacattagaaataattgaccctctccatactgaactttggggtact
agcaacaaaaagaaaagtctctttcagatgttgaagactacaaagactacaggagggtgt
agactactgagagccaacttgttacagccactaaaagatattcagactatcaatactcgg
cttgactgcttggatgagctaatgagcaatgaggaactattctttggcttgacacaaggt
ctccgtaaatttccaaaagaatcagataaggttctctgtcacttctgcttcaaacccaaa
aagatcactgatgagataccgaagcctgccaatggtcgaaagagccaattgttgatatct
gacattatcgttctaaaaactgctttggatgcaataccattcctctccaaggttctgaag
ggggcaaaaagttttcttcttcagaacatttatcagactgtgtgtgaaaacccaaagtat
gcaaggatgagaaagagaatcggggatgtgattgatgaagatgctgttcattcaagggct
ccttttgcagcttgcactcagcaatgttttgctattaaggcaggcattgatgggctgctt
gatgttgctcgcagatctttctgcgataccagtgaagctatacataatctcgccaccaag
tacagagaggagtgtcagctgccaaatttgaagataccttataacaacagactggggttt
tactttattataccccagaaggacattactggaaagcttcctagtaaatttatccaggtt
gttaggcatgggaagaatgtgcattgctcaagctttgagcttgcttcgctaaatgctagg
aacaagtcagctgctgctgagtgcttcttgcgcacagaactttgtttggaaggacttatt
agtgagatcagagaagacattggtatcttaacattgcttgctgaagtactatgtcttttg
gacatgattgtaaattcctttgccaatacaatatctacaaagcctgtcgatcgttacacg
agaccggagttcacagatgatggaccaatggcgatcaatgccggacggcatcctattctc
gagggcttgcatactgattttgtccctaataatatctttctttccgaagcgtcaaatatg
gttcttgtcatgggcccaaacatgagtgggaaaagtacatatcttcagcagatttgtctg
atagtcattcttgcgcaagtcggctgttatgttccagctcagtttgcatcactgagagtg
gttgatcgtatattcacacgaataggaactggagacaatgttgaaaacaactctagcacg
tttatgacggaaatgaaagagacagctttcatcatgcaaaatgtttcttcaaagagcttg
gttgtagtggatgagcttggaagagctacttcttcctctgatgggttggcaattgcatgg
agctgctgcgaacacctactatccctcaaagcctacaccgtgtttgccacacacatggag
ggcttgtcagaactcgcgacgatgtatccaaatgtgaagacgcttcatttcgaagtcaac
ttgagaaacaaccgcttggatttcaagttccagctgaaggatggtttgcgacgggtacct
cactatggacttctgctagccagagtggctggtctccctgcttccgtggttgatacggca
acgaacatcacttcgcgtatcacagagcaggaaatggttaggatggatgcgaactgtgag
cagtaccggccgctccagatggcctaccaggctgctcaacggctcatctgcttgaagtac
tcgaaccaaggcgatgagtacatccgtgaagcgctgcaggacctcaaggagagctacgcc
gcaggcaagctgacacgaaaaaaagaaatgcgatga
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