Brachypodium distachyon (stiff brome): 100822026
Help
Entry
100822026 CDS
T01717
Name
(RefSeq) transport inhibitor response 1-like protein Os05g0150500
KO
K14485
transport inhibitor response 1
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
100822026
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bdi04121
]
100822026
Ubiquitin system [BR:
bdi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
100822026
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
LRR_At5g56370
LRR_4
F-box_5
F-box-like
LRR_8
F-box
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
100822026
NCBI-ProteinID:
XP_003568922
UniProt:
I1HLS4
LinkDB
All DBs
Position
2:35878953..35884941
Genome browser
AA seq
590 aa
AA seq
DB search
MGRGVGSRSGGGAAQPPWHSLPDEVWEHAFSFLPAAADRGAAAGACRGWLRAERRSRRRL
AVANCYATSPRDAVERFPSVRAAEVKGKPHFADFGLVPPAWGAEAAPWVAAAADGWPLLE
ELSFKRMVVTDECLEMIAASFRNFQVLRLVSCEGFSTAGLAAITEGCRNLRELDLQENYI
EDCSSHWLSSFPESFTSLETLNFSCLDGEVNFAVLERLVTRCHNLKTLKLNNAIPLDKVA
SLLRKAPHIVELGTGKFSADYHPDLFAKLEAAFAGCKSLRRLSGAWDAVPDYLSAFYGVC
EGLTSLNLSYATVRGPELIKFISRCKNLQQLWVMDLIEDHGLAVVASTCSKLQELRVFPS
DPFGAGQVLLTERGLVDVSASCPMLESVLYFCRRMTNEALITIAKNRPNFTCFRLCILEP
RTPDYITQQSLDAGFSAIVESCKGLRRLSVSGLLTDLVFKSIGEHADRLEMLSIAFAGNS
DLGLHYILSGCKSLKKLEIRDCPFGNKPLLANAAKLETMRSLWMSSCSLTLGACRQLAQK
MPRLTVEIMNDPGRACPLDALPDESPVEKLYVYRTIAGPRSDTPDYVQIV
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgggccgcggcgtcggctcgcgctccggcggcggcgccgcgcagcctccgtggcactcg
ctcccggacgaggtctgggagcacgccttctccttcctccccgccgccgccgaccgcggc
gccgcggcgggcgcctgccgcggctggctccgcgccgagcgccgctccaggcgccgcctc
gccgtcgccaactgctacgccacgtccccgcgcgacgccgtcgagcggttcccctccgtg
cgcgccgccgaggtcaagggcaagccgcacttcgccgacttcgggctcgtcccgcccgcc
tggggcgccgaggccgcgccctgggtcgccgccgccgccgacggctggccgctgctcgag
gagctcagcttcaagcgcatggtcgtcaccgacgagtgcctcgagatgatcgcggcctcc
ttcaggaacttccaggtcctgcgcctcgtctcctgcgagggattcagcaccgccgggctc
gccgccattaccgagggttgcagaaatttgagagaacttgaccttcaagagaattatatt
gaggattgttccagtcattggctcagtagctttccagaatccttcacttctctggaaact
cttaatttttcatgcttagatggggaggtcaattttgcagtacttgagcggctagtgacc
agatgtcacaatctcaagactctaaagctcaataatgcaatccctcttgataaggttgct
agtctccttcgtaaggctccgcacatagtagaacttggaactggcaaattctctgctgat
tatcatccagatctctttgcaaagcttgaagcagcatttgcaggttgtaaaagcctgaga
aggctatctggggcttgggatgctgttccagattacctgtcagcattttatggtgtatgt
gaaggcctcacatcacttaatctgagttatgctactgttcgaggccctgagctcattaaa
tttattagcagatgcaagaatctgcagcaattatgggtcatggatctcattgaggaccat
ggtctagctgtcgtggcatcaacttgcagtaaactacaagagttgcgggtcttcccttct
gacccttttggtgctgggcaagttttgttgactgaaagaggtcttgttgatgtttctgcc
agttgtcccatgttggagtcggtcctctacttctgcaggcggatgacgaatgaggctctt
attacaattgcaaagaaccgtcccaacttcacctgcttccgcctatgcatccttgagccc
cgtactccagattacatcacacaacagtctcttgatgcaggtttcagtgccattgtggaa
tcatgcaagggccttaggcgcctctctgtctccggccttctcacagatcttgtatttaaa
tcaatcggtgaacatgctgatcgtcttgagatgctttcaatagccttcgctgggaacagc
gatctaggcctgcactatatcctctcaggctgcaagagcctaaagaagctggagatcagg
gactgcccatttgggaataagccgttgctggcaaatgctgccaagctggagacaatgcga
tccctttggatgtcgtcatgctcgttgaccctgggcgcatgccgacagcttgcacaaaag
atgcctcgccttactgtggagatcatgaacgatcctggacgagcatgtcccttggatgca
cttccggatgaaagccctgttgagaaattgtatgtgtaccggacaattgccggtccaagg
tctgacacaccagactacgtccagattgtttaa
DBGET
integrated database retrieval system
