Brachypodium distachyon (stiff brome): 100822119
Help
Entry
100822119 CDS
T01717
Name
(RefSeq) lys-63-specific deubiquitinase BRCC36
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
100822119
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bdi01002
]
100822119
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bdi04121
]
100822119
03036 Chromosome and associated proteins [BR:
bdi03036
]
100822119
03400 DNA repair and recombination proteins [BR:
bdi03400
]
100822119
Peptidases and inhibitors [BR:
bdi01002
]
Metallo peptidases
Family M67
100822119
Ubiquitin system [BR:
bdi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
100822119
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
100822119
BRISC complex
100822119
Chromosome and associated proteins [BR:
bdi03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
100822119
DNA repair and recombination proteins [BR:
bdi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
100822119
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCC36_C
JAB
Prok-JAB
UPF0172
CC_Cfap43
Motif
Other DBs
NCBI-GeneID:
100822119
NCBI-ProteinID:
XP_003567982
UniProt:
I1HGZ8
LinkDB
All DBs
Position
2:complement(16038112..16043541)
Genome browser
AA seq
428 aa
AA seq
DB search
MSLTEVKIGEEVWLTCLSHALTTETEEVMGLLLGDVESSSRGGSVAVIWGASPQMRCERK
KDRVEVNPELLAAATAQAEVMTATIGKTTRVIGWYHSHPHITVLPSHVDVRTQAMFQLLE
PGFVGLIFSCFSEDAQKVGKIQVIAFQSLDGTQRAIVPVITDPVIDLESSWSSSDKSLTP
KYAAIEGIEQDTGDSRALKGSKVWGRSLDADLYSHLDTNHSSKHQPRENAIVAYEPDNLP
GVSADQDGSDMSPSIQEALHRSTMDISGAEYRRREVPLHVFPTRHLLKLDTTLTSYCDMQ
HVLFQEEQSAYNQAMLQNICDGKMHPLTSIHHTSTYNSSLCKLMEYCLSPAITVLQDRLK
EQELQLSMLVEEAKELEAENQSMRNVSPRRLMLRGTSGSSSPRALDKYASAKQGGPISPS
GSSRRKAS
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgaccgaggtcaagatcggcgaggaggtgtggctcacctgcctctcccacgcc
ctcaccaccgagaccgaggaggtcatgggcctcctcctcggcgacgtcgagtcctcgagc
aggggcggctccgtcgcggtgatatggggcgcgtcgccgcagatgaggtgcgagcggaag
aaggaccgcgtcgaggtcaaccccgagctgctcgcagccgccacggcgcaggccgaggtt
atgacggccaccatcgggaagacgaccagggtgatcggctggtatcactcgcatccgcat
atcactgtcctgccttcccatgtagatgttcgtacccaagcgatgtttcaactgctagaa
ccaggcttcgtggggctgatattttcttgttttagcgaagatgcccaaaaggttgggaaa
atccaagtgattgccttccagtcacttgacgggacacaacgtgctattgttcctgttatt
accgatccagtcatcgaccttgagtcatcttggagttcatcagataaatcactaacacca
aagtatgcagcaattgagggcattgaacaggacacaggggattctagagctctgaaagga
agcaaggtctggggaagatctctggatgcagatctctattctcatctcgacacaaatcat
tcatcaaaacatcaacccagagaaaacgctattgttgcttatgaaccggataaccttcca
ggagtttctgctgatcaagatggttcagatatgtccccaagcattcaggaggctttgcac
cgatcaactatggacataagtggtgcagagtataggaggagggaggtgcctcttcatgta
tttccaacaaggcatctgctaaagctggacactacgttgacttcttactgtgatatgcag
catgtccttttccaagaggaacaatcagcatataatcaagccatgctacaaaatatttgt
gatgggaagatgcacccccttacatctattcaccatacatctacgtacaattcatctctc
tgtaaactaatggaatattgtttgagcccagctataactgtacttcaggatcgcctgaag
gaacaagaacttcagctatctatgctagtggaggaggctaaagaactcgaggctgagaac
caaagcatgagaaatgtttctcctcgtcgcttgatgctccgtgggactagtggtagcagt
tcaccaagggccctggataagtacgcttccgccaaacaaggggggccaataagccccagc
ggaagcagcaggagaaaggcttcttga
DBGET
integrated database retrieval system
