KEGG   Brachypodium distachyon (stiff brome): 100822166
Entry
100822166         CDS       T01717                                 
Name
(RefSeq) ras-related protein RABF1
  KO
K07887  Ras-related protein Rab-5A
Organism
bdi  Brachypodium distachyon (stiff brome)
Pathway
bdi04144  Endocytosis
bdi04145  Phagosome
bdi04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:bdi00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    100822166
   04145 Phagosome
    100822166
   04148 Efferocytosis
    100822166
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:bdi04131]
    100822166
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:bdi04147]
    100822166
   04031 GTP-binding proteins [BR:bdi04031]
    100822166
Membrane trafficking [BR:bdi04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    100822166
 Endosome - Lysosome transport
    100822166
Exosome [BR:bdi04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100822166
  Exosomal proteins of other body fluids (saliva and urine)
   100822166
  Exosomal proteins of colorectal cancer cells
   100822166
  Exosomal proteins of bladder cancer cells
   100822166
GTP-binding proteins [BR:bdi04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    100822166
SSDB
Motif
Pfam: Ras Roc Arf RsgA_GTPase Gtr1_RagA GTP_EFTU MMR_HSR1 ATPase AAA_7 TniB AAA_16
Other DBs
NCBI-GeneID: 100822166
NCBI-ProteinID: XP_003558794
UniProt: I1H9M7
LinkDB
Position
1:72179413..72183650
AA seq 199 aa
MGCSSSVPARSTGGLNNINDNSTATDSNELRAKLVLLGDSGVGKSCIVLRFVRGQFDPTS
KVTVGASFLSQTLALEDSTIVKFEIWDTAGQERYAALAPLYYRGAAAAIVVYDITSPESF
KKAQYWVKELQKHGNPGIIMVLVGNKADLHESRSVPTQEAQEYAEKNSMFFMETSAKTAD
NINQLFEEIAKRLPRPTAS
NT seq 600 nt   +upstreamnt  +downstreamnt
atgggttgctcctcctccgtgccagctagaagtactggagggctgaacaatatcaacgat
aactccactgctactgactcaaacgaattgcgtgccaagttagtattattaggagattca
ggtgttggaaaaagctgcattgttcttcgctttgtgcgtggtcagttcgatcccacttcc
aaggtaactgtcggtgcatcatttttatcgcaaacgctggcattggaggattcaacaata
gtgaagtttgaaatatgggatactgctggacaagagaggtatgctgccttggcacctctg
tattacagaggagctgctgctgctattgttgtctatgacataactagtccagaatcattc
aagaaagcacaatactgggtgaaggaacttcaaaaacacggtaatcctggtattatcatg
gttttggttggtaataaagctgatctacatgaaagtcgaagtgtacctactcaggaggca
caggagtacgcagaaaagaacagtatgtttttcatggagacgtcagcaaaaacagctgat
aatattaatcaattgtttgaggaaattgcaaaaaggttgccgaggccaacggcgtcttga

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