Brachypodium distachyon (stiff brome): 100822246
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Entry
100822246 CDS
T01717
Name
(RefSeq) U1 small nuclear ribonucleoprotein C-1
KO
K11095
U1 small nuclear ribonucleoprotein C
Organism
bdi
Brachypodium distachyon (stiff brome)
Pathway
bdi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100822246
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bdi03041
]
100822246
Spliceosome [BR:
bdi03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
100822246
Complex B
100822246
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-U1
CLIP1_ZNF
Motif
Other DBs
NCBI-GeneID:
100822246
NCBI-ProteinID:
XP_003572258
UniProt:
I1HZD7
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Position
3:complement(8091121..8095698)
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AA seq
211 aa
AA seq
DB search
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLLDQRIKEHLGQ
AAAFQVGAPFNQHMLQFPGNVPRPRLPILPTPMMPHGFPQQPGGPFARPPILPVPGAPGY
PGAPTMPQPGGPPGSMPMQMAPLPRPPTLPPPTSGAPGAPMSNNAAPPGPPPMYQQNQPP
TAGPTSGAPPPAPAAPPQAAFSYSQPPEGSH
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgccccggtattattgtgattactgtgacacttaccttacccatgactcgccatctgtc
cgtaagcaacacaatgctggatacaaacataaggcaaatgttcgaagctactaccaacag
tttgaggagcagcaaactcaaagtttgcttgatcaaaggatcaaggaacatctgggacaa
gctgcagctttccaagtcggtgctcctttcaaccaacatatgctccaatttccaggaaat
gtaccccgtcctcgtcttccgattttgcccacacctatgatgccacatggttttcctcaa
caacctggtgggccgtttgctaggcctcctattttaccagttcctggtgctccaggttat
cctggtgctccaaccatgccgcaaccaggaggtcctcctgggtccatgcctatgcagatg
gcacctctcccaaggcctccgacgctgccgcccccgacatctggagccccaggtgccccc
atgtccaacaacgcagcacctccaggtcctccacccatgtatcaacaaaatcagccacca
actgctggaccaacttctggtgctccgccaccggcaccggcagctcccccacaggccgca
ttctcttactcgcaaccccctgagggcagccactga
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