Brachypodium distachyon (stiff brome): 100822261
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Entry
100822261 CDS
T01717
Name
(RefSeq) condensin-2 complex subunit D3 isoform X1
KO
K11491
condensin-2 complex subunit D3
Organism
bdi
Brachypodium distachyon (stiff brome)
Brite
KEGG Orthology (KO) [BR:
bdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bdi03036
]
100822261
Chromosome and associated proteins [BR:
bdi03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin II
100822261
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cnd1
PDS5
NUDIX_5
Adaptin_N
Motif
Other DBs
NCBI-GeneID:
100822261
NCBI-ProteinID:
XP_003575628
UniProt:
A0A0Q3EJ37
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Position
4:4396099..4402559
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AA seq
1264 aa
AA seq
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MDSDDMDVDEMDTPSPSGSLSALLSELAALHGRSSSSTADSASPPLSLPSLTFLSSAAIP
ASFFPRLAAAGLPASSVLAPLTSSFSAHPLPAATAYLRLLLAPASPIVSLFSPLPFLSFL
LALRKAASSTADAHNPSTGSGNAKPRKRKNQRQPAAPRSPSFLPEALSLLASAAGRLPLG
SHPDARRSLIDTAAELTAFDVLAAVLGSNYQAEAVQDVVRALAPVAISGTKSSARAAAVE
FLVTKVVPLGAVGGEEANRKVVRYLPRYLAMKAPEKSDARGLAVEAIVEVVRAMEPRERE
DFAAYMVSMARGKAKGRLFAVDMVLAILPVLLQSEADEFGLEEGSWGLKCVQVLVERCSD
MVGGVRARALTNAAHALDILSERGVEVDRLQEVMMIGNMGLGELLRRRCIDDKAAVRKAA
LVLITKAIGLIGRPVDESLLSAMGAACSDPLVSIRKAALAAISEVFRKFPDERVTKEWLQ
AVPSLVTDSESSIQEECENFFLELVLNRVCRAANSHLDDDSVNLEDVFPEGTLDLLKSIC
DGEVAPCIKRICASLGKKKKLKPLLASSLQNIVTISESLWSRSSKPIEEWTAPTGAWWLL
AEVSSFAPKSVNWKFLSHHWKLLDNVGQEGRGKAYSKGEPKSALWAVDRVSLLQTISNVS
MELPVEPAAELAHSLLTRIEDFDMHLSEVDAHVKSLKTLCKRKAKTTKEGEALVLKWAQQ
LILKAVNILDGYIKGTSEASRGFSFHTPLTGKLNGRAEASILKSAAQAVVVVFTVGSLIL
ACPDTSVQHIIPLLHTIITSGNSEPRPKNLAGGAVSFKELAPSLYIQSWDTMAKICLVDD
KLAKRYIPLFVQELERSDMATLRNNIMIAMADFYVRYTALVDCYMSKITKSLRDPCEVVR
RQTFILLSKLLQRDYVKWRGVLFLRFLPSLVDESEKIRHLADFLFGSILKAKAPLLAYNS
FIEAIFVLNNCTGHGGYSESQGSDKGPTLFAIRGTDERSRSKRMHIYVSLLKQMAPEHLL
ATSAKLCAEILAAVCDGLLSVDDAAGRAVLQDALQVLACKEMRIHPNICTDNSEMDDEGG
DGGSASALLAAKGRAVTQVAKKNLIQIAVPIFIELKRLLESKNSPLTGCLMECLRALLKD
YKNEIDEILVADKQLQKELLYDMQKFEAVKGKSSRDAEAGPSGSSPTAQGNVPDGTAPCD
VAAKATVRSVLKEMNRKTPTPPLHSMSVPKVKSMLGPGAMSGSRRPAVLESVRRLEPFES
DDEN
NT seq
3795 nt
NT seq
+upstream
nt +downstream
nt
atggactccgacgacatggacgtcgacgagatggacaccccctccccctccggctccctc
tccgccctcctatccgagctcgccgccctccacggccgctcctcctcctccacagcggat
tccgcctccccgcccttgtctctcccttcgctcaccttcctctcctcagcggccatcccc
gcctccttcttcccccgcctggctgccgccggcctccccgcctcctccgtcctcgcgcct
ctcacctcctccttctccgcccacccgctccccgccgccactgcctacctccgcctcctc
ctggcccccgcttcgcccatcgtctccctcttctccccgctcccgttcctctccttcctc
ctcgccctacgaaaggcggcttcgtccaccgctgacgcccacaaccctagcaccggctcc
gggaacgccaaaccccgcaagcgcaagaaccagcgccagccggcggcgccgcggtccccg
tccttcctcccggaggctctctccctgctcgccagtgccgcagggaggcttcctcttggg
tcgcaccctgatgcgcggaggtcactcatcgacaccgctgccgagctcacggccttcgat
gtcctcgctgccgtcctcggatctaactaccaggctgaggcggtgcaggatgtggtgcgt
gcgctggctcctgtggcgatctctggcacgaagtcgtctgcgcgggcggctgcagtggaa
ttcttggttacaaaggttgtgcctttgggtgcagtgggaggggaggaggcaaacaggaag
gtggtgagatacctgcccaggtatttggctatgaaggcgccagagaagtcggacgcgaga
gggctggcggttgaggcgatagttgaggtggtgcgggcaatggagccacgggaaagggag
gacttcgctgcgtatatggtgtcaatggcaaggggtaaggcaaagggacggctgtttgct
gtggatatggtcctggcgatactgccggtgctgctgcaatcagaagcggatgaatttggt
ctggaggagggctcttggggtctgaagtgtgtccaggtattggtagagaggtgttcggat
atggtgggaggtgtcagggctcgggccttgacaaatgcagcccatgcgcttgatatttta
tctgaaagaggtgtggaggttgatcggttgcaggaggtgatgatgatcggaaacatgggt
ctaggggagctgttgaggcgacggtgcattgatgataaggctgctgtgaggaaggctgca
cttgtgctcatcacaaaggcaattggcttgattggcaggcctgttgatgagtcgctactc
agtgcaatgggggctgcgtgctctgatccgttagtcagcatccgcaaggcggctcttgcc
gccatctcagaggtgttccggaaattcccagatgagagagtgacaaaagagtggcttcag
gctgtgccatctctggtgactgacagtgagtctagtatccaagaggaatgcgagaacttc
tttcttgaactggttctgaacagggtatgccgagctgccaattcgcacctagatgatgat
tcggtcaacttggaggatgtttttccagaagggacactggatttgctgaaaagcatatgt
gatggagaggttgctccatgcataaaaaggatatgtgcaagccttgggaagaagaaaaag
ctgaaaccattgcttgctagttcactccagaacatcgtaacaatatctgaatccttgtgg
tcgagaagttctaagccaattgaggaatggactgcaccaactggggcttggtggcttctt
gctgaggtctcgtcatttgcacctaaatcagttaactggaagttcctctctcaccactgg
aaactccttgataatgttggccaagaaggcagaggtaaagcttattctaaaggggaacca
aaatctgcgctctgggctgtggatcgtgtttctctcctgcaaactatttcaaatgtctcc
atggagctacctgtggaacctgcagcagagctggcacacagcctgctcacgcggattgag
gattttgatatgcacctgagtgaggttgatgcccatgtaaaatcgctgaaaactttatgc
aagcggaaagcaaaaacaaccaaagaaggtgaagcactagtactgaagtgggcgcagcaa
cttatattgaaagcagttaacattctagatggctacataaaagggacatcagaagcttcc
aggggttttagtttccatacacctctgactggaaaacttaatggaagagcagaggcatcc
atattgaagtcggcggcgcaggctgttgttgttgtcttcaccgttggttcactgatccta
gcttgtcccgatactagtgtgcaacacatcattcctttgctgcacacaatcataacctct
ggaaactctgagccaaggccaaaaaaccttgctggtggagccgtgtctttcaaagagtta
gccccatctttatatatacagtcgtgggatacaatggcaaaaatatgccttgtggatgac
aaactagcaaaacgatatattccactttttgttcaggagcttgagcggagtgatatggct
acccttcggaataatatcatgattgcaatggcagacttttatgtccgttatactgcatta
gttgactgttatatgtcgaaaataacaaaatcattgcgtgatccctgtgaagttgtacgg
agacaaacatttatcctactctcaaagttgctgcagagagactacgtaaaatggagagga
gtgcttttccttcggtttctgccatctttagttgatgaatcagagaagattaggcatttg
gctgacttcctttttgggagtatcctaaaagctaaagcgccacttcttgcatacaacagt
ttcatagaagctatctttgtcctgaacaattgcacaggacatggtggatatagcgagtct
caaggttcagacaaaggacccaccctttttgcaatacgcggcactgatgaaaggtcaagg
tcaaaaagaatgcacatatatgtctccttgttgaaacaaatggcgccggagcaccttcta
gctacatcagccaagttatgtgctgagatcttggcagctgtttgtgatggcttacttagt
gttgacgatgcagctggaagggctgtacttcaggatgctttacaagtattggcttgcaag
gagatgcgcatccatcccaacatctgcacagataattctgagatggacgatgaaggcgga
gatggtgggtcagccagtgccctcctcgcggccaaagggagggcagttacccaggtggcg
aaaaagaacctgatccagatcgcggtaccgatattcattgagctcaagcggctgctggag
agcaagaacagccccctcactgggtgcctgatggagtgtctgcgcgccctgctcaaggac
tacaagaacgagatcgacgagatactggtggcggacaagcagctccagaaggagctcctc
tacgacatgcagaaattcgaggcagtcaaggggaagtcatccagggacgcagaggctggg
cccagtgggagctccccgactgcgcagggtaatgttcctgacggcacagcaccctgtgat
gttgctgcgaaagccactgtgcgctcagtgctcaaggagatgaatcggaagacgccaacg
ccaccactgcattcgatgagcgttcccaaggtgaagtcgatgctgggccctggagcgatg
agtggctcgcgccgtccggctgttctcgagtctgtgaggcggttggagccgtttgagtca
gacgatgagaattag
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